RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 GTPBP6O43824 516 aaPredicted RBP25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 CFBP00751 764 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 CASP1P29466 404 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 GPR162Q16538 588 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 Q4G0T1 1027 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 LENG9Q96B70 501 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 GSDMAQ96QA5 445 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 CUEDC2Q9H467 287 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 TTC12Q9H892 705 aaPredicted RBP25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 LRWD1Q9UFC0 647 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 AFG3L2Q9Y4W6 797 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 SNCAIPQ9Y6H5 919 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 RBBP6Q7Z6E9 1792 aaKnown RBP25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 PLCG1P19174 1290 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 EPHX2P34913 555 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 HMGCS2P54868 508 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 NCAPHQ15003 741 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 SARM1Q6SZW1 724 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 KRT26Q7Z3Y9 468 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 ZC3H15Q8WU90 426 aaKnown RBP25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 RAB34Q9BZG1 259 aa25.42■■□□□ 1.66
VCPKMT-205ENST00000569518 GLTPD2A6NH11 291 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 IKBKBO14920 756 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 PLCB2Q00722 1185 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 GHRHRQ02643 423 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 PRKG1Q13976 671 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 VGLL4Q14135 290 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 MLKLQ8NB16 471 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 RASSF8Q8NHQ8 419 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 STAMQ92783 540 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 KBTBD4Q9NVX7 518 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 PTPRFP10586 1907 aa25.41■■□□□ 1.66
VCPKMT-205ENST00000569518 POTEMA6NI47 508 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 HSD17B4P51659 736 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 MAP3K9P80192 1104 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 FCHSD1Q86WN1 690 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 ETNPPLQ8TBG4 499 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 CLEC4DQ8WXI8 215 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 MAGEF1Q9HAY2 307 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 FAM86B1E9PN63 330 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 TBX3O15119 743 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 FAM86B2P0C5J1 330 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 FDX1P10109 184 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 CUL4BQ13620 913 aa25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 TRIM44Q96DX7 344 aaPredicted RBP25.4■■□□□ 1.66
VCPKMT-205ENST00000569518 HS1BP3Q53T59 392 aa25.39■■□□□ 1.65
VCPKMT-205ENST00000569518 PLA2G4DQ86XP0 818 aa25.39■■□□□ 1.65
VCPKMT-205ENST00000569518 GJA10Q969M2 543 aa25.39■■□□□ 1.65
VCPKMT-205ENST00000569518 VWA5AO00534 786 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 GRIN3BO60391 1043 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 MYL1P05976 194 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 GRB10Q13322 594 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 PRR16Q569H4 304 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 SH3D19Q5HYK7 790 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 SLFN12Q8IYM2 578 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 PLIN2Q99541 437 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 BLZF1Q9H2G9 400 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 RAVER2Q9HCJ3 691 aaKnown RBP25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 PNMA2Q9UL42 364 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 PCDHA12Q9UN75 941 aa25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 COL11A1P12107 1806 aaPredicted RBP25.38■■□□□ 1.65
VCPKMT-205ENST00000569518 CALML4Q96GE6 196 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 PNMA5Q96PV4 448 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 ADAMTS5Q9UNA0 930 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 IGLV3-22A0A075B6J6 115 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 SMTNL1A8MU46 457 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 NFIBO00712 420 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 PPP1R12BO60237 982 aaPredicted RBP25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 ZNF75DP51815 510 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 MYL5Q02045 173 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 ATG4CQ96DT6 458 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 CDCA5Q96FF9 252 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 HSD3B7Q9H2F3 369 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 DACH1Q9UI36 760 aa25.37■■□□□ 1.65
VCPKMT-205ENST00000569518 ZBED4O75132 1171 aa25.36■■□□□ 1.65
VCPKMT-205ENST00000569518 CPXCR1Q8N123 301 aa25.36■■□□□ 1.65
VCPKMT-205ENST00000569518 REPS2Q8NFH8 660 aa25.36■■□□□ 1.65
VCPKMT-205ENST00000569518 RBM46Q8TBY0 533 aaKnown RBP25.36■■□□□ 1.65
VCPKMT-205ENST00000569518 WNK4Q96J92 1243 aa25.36■■□□□ 1.65
VCPKMT-205ENST00000569518 MARCH6O60337 910 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 SPIRE1Q08AE8 756 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 TMEM119Q4V9L6 283 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 CT47A1Q5JQC4 288 aaPredicted RBP25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 KRT79Q5XKE5 535 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 NUDT12Q9BQG2 462 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 TAF1DQ9H5J8 278 aaPredicted RBP25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 EHMT1Q9H9B1 1298 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 STK17AQ9UEE5 414 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 DSG3P32926 999 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 CATSPERGQ6ZRH7 1159 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 MCF2L2Q86YR7 1114 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 CYP2W1Q8TAV3 490 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 SNX29Q8TEQ0 813 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 FAM20AQ96MK3 541 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 TRIM5Q9C035 493 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 BLOC1S4Q9NUP1 217 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 TMOD4Q9NZQ9 345 aa25.35■■□□□ 1.65
VCPKMT-205ENST00000569518 RPTORQ8N122 1335 aa25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 LOC285556D6RIA3 1793 aa25.34■■□□□ 1.65
VCPKMT-205ENST00000569518 POTECB2RU33 542 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms