RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 POLD4Q9HCU8 107 aa9.78□□□□□ -0.84
LINC00558-201ENST00000569422 EPN1Q9Y6I3 576 aaPredicted RBP9.78□□□□□ -0.84
LINC00558-201ENST00000569422 TTLL1O95922 423 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 CHMP4BP1P59074 171 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 TTI2Q6NXR4 508 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 OR8K1Q8NGG5 319 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 HINFPQ9BQA5 517 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 TANGO6Q9C0B7 1094 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 KANSL2Q9H9L4 492 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 JMJD4Q9H9V9 463 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 FAM207AQ9NSI2 230 aaPredicted RBP9.77□□□□□ -0.84
LINC00558-201ENST00000569422 HDAC6Q9UBN7 1215 aa9.77□□□□□ -0.84
LINC00558-201ENST00000569422 ERICH4A6NGS2 130 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 MYMKA6NI61 221 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 PNMA6AP0CW24 399 aaPredicted RBP9.77□□□□□ -0.85
LINC00558-201ENST00000569422 FOXD4Q12950 439 aaPredicted RBP9.77□□□□□ -0.85
LINC00558-201ENST00000569422 TMEM266Q2M3C6 531 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 CDC42EP5Q6NZY7 148 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 KCNK18Q7Z418 384 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 GOLGA1Q92805 767 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 CAPZA3Q96KX2 299 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 TRPC5Q9UL62 973 aaPredicted RBP9.77□□□□□ -0.85
LINC00558-201ENST00000569422 BTAF1O14981 1849 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 LGALS16A8MUM7 142 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 LAD1O00515 517 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 PPP1R11O60927 126 aaPredicted RBP9.77□□□□□ -0.85
LINC00558-201ENST00000569422 SRGAP2O75044 1071 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 NDUFA10O95299 355 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 GDF11O95390 407 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 AMPD3Q01432 767 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 DMTNQ08495 405 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 GRB10Q13322 594 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 NCAPH2Q6IBW4 605 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 KIAA1328Q86T90 577 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 PROM2Q8N271 834 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 SDR16C5Q8N3Y7 309 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 TRIM34Q9BYJ4 488 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 RIOX1Q9H6W3 641 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 MMRN2Q9H8L6 949 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 ZCCHC17Q9NP64 241 aaKnown RBP9.77□□□□□ -0.85
LINC00558-201ENST00000569422 SUGT1Q9Y2Z0 365 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 FHOD1Q9Y613 1164 aa9.77□□□□□ -0.85
LINC00558-201ENST00000569422 HLA-DOAP06340 250 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 CCNE1P24864 410 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 PRPHP41219 470 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 KCNB1Q14721 858 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 ENOX2Q16206 610 aaKnown RBP9.76□□□□□ -0.85
LINC00558-201ENST00000569422 USH1GQ495M9 461 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 CCDC122Q5T0U0 273 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 KRT79Q5XKE5 535 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 C15orf52Q6ZUT6 534 aaKnown RBP9.76□□□□□ -0.85
LINC00558-201ENST00000569422 SP8Q8IXZ3 490 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 CCDC155Q8N6L0 562 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 KIAA0895Q8NCT3 520 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 LARP4BQ92615 738 aaKnown RBP9.76□□□□□ -0.85
LINC00558-201ENST00000569422 AK8Q96MA6 479 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 DRC1Q96MC2 740 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 COA1Q9GZY4 146 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 GAKO14976 1311 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 MACROD2A1Z1Q3 448 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 MMP10P09238 476 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 KRT27Q7Z3Y8 459 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 NELFCDQ8IXH7 590 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 TEKT1Q969V4 418 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 CCDC51Q96ER9 411 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
LINC00558-201ENST00000569422 CRAMP1Q96RY5 1269 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 SEMA6BQ9H3T3 888 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 PSTPIP2Q9H939 334 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 ZNHIT6Q9NWK9 470 aaKnown RBP9.76□□□□□ -0.85
LINC00558-201ENST00000569422 DDX25Q9UHL0 483 aaKnown RBP9.76□□□□□ -0.85
LINC00558-201ENST00000569422 ATP6V0A2Q9Y487 856 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 DUSP10Q9Y6W6 482 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 ITIH6Q6UXX5 1313 aa9.76□□□□□ -0.85
LINC00558-201ENST00000569422 NPHP3-ACAD11A0A0J9YXS1 232 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 PLEKP08567 350 aaPredicted RBP9.75□□□□□ -0.85
LINC00558-201ENST00000569422 EEF1GP26641 437 aaKnown RBP9.75□□□□□ -0.85
LINC00558-201ENST00000569422 SHMT1P34896 483 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 SLC1A4P43007 532 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 ZNF543Q08ER8 600 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 ECM1Q16610 540 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 ASPRV1Q53RT3 343 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 KRT26Q7Z3Y9 468 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 DDX12PQ92771 950 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 PNMA5Q96PV4 448 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 NAPGQ99747 312 aaPredicted RBP9.75□□□□□ -0.85
LINC00558-201ENST00000569422 THAP9Q9H5L6 903 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 BLOC1S4Q9NUP1 217 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 CDC23Q9UJX2 597 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 STAT3P40763 770 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 ARHGAP25P42331 645 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 DNM2P50570 870 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 CNNM4Q6P4Q7 775 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 COL23A1Q86Y22 540 aaPredicted RBP9.75□□□□□ -0.85
LINC00558-201ENST00000569422 SPICE1Q8N0Z3 855 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 DHTKD1Q96HY7 919 aaPredicted RBP9.75□□□□□ -0.85
LINC00558-201ENST00000569422 TSPAN18Q96SJ8 248 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 SUGCTQ9HAC7 445 aa9.75□□□□□ -0.85
LINC00558-201ENST00000569422 REXO2Q9Y3B8 237 aaKnown RBP9.75□□□□□ -0.85
LINC00558-201ENST00000569422 PNMA6FA0A0J9YX94 578 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms