RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 CCDC155Q8N6L0 562 aa10.86□□□□□ -0.67
TCF4-243ENST00000569357 EDAQ92838 391 aa10.86□□□□□ -0.67
TCF4-243ENST00000569357 PURBQ96QR8 312 aaKnown RBP10.86□□□□□ -0.67
TCF4-243ENST00000569357 DNAJC2Q99543 621 aaKnown RBP10.86□□□□□ -0.67
TCF4-243ENST00000569357 POP1Q99575 1024 aaKnown RBP10.86□□□□□ -0.67
TCF4-243ENST00000569357 WDR11Q9BZH6 1224 aa10.86□□□□□ -0.67
TCF4-243ENST00000569357 ATP8A2Q9NTI2 1148 aa10.86□□□□□ -0.67
TCF4-243ENST00000569357 CLIP2Q9UDT6 1046 aa10.86□□□□□ -0.67
TCF4-243ENST00000569357 FEM1BQ9UK73 627 aa10.86□□□□□ -0.67
TCF4-243ENST00000569357 ABHD14A-ACY1A0A1B0GW23 586 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 GOLIM4O00461 696 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 GPM6BQ13491 265 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 IKBKEQ14164 716 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 SLFNL1Q499Z3 407 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 NFRKBQ6P4R8 1299 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 NSMFQ6X4W1 530 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 TRIM67Q6ZTA4 783 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 CLUAP1Q96AJ1 413 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 TRERF1Q96PN7 1200 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.85□□□□□ -0.67
TCF4-243ENST00000569357 VTA1Q9NP79 307 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 NYAP2Q9P242 653 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 CIZ1Q9ULV3 898 aaPredicted RBP10.85□□□□□ -0.67
TCF4-243ENST00000569357 BRWD1Q9NSI6 2320 aa10.85□□□□□ -0.67
TCF4-243ENST00000569357 ANP32CO43423 234 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 CSPG5O95196 566 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 SELPP16109 830 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 PKN1Q16512 942 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 EPC2Q52LR7 807 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 LRRC8DQ7L1W4 858 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 BMP8AQ7Z5Y6 402 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 RPAINQ86UA6 219 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 FBXL6Q8N531 539 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 CAGE1Q8TC20 777 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 NSUN3Q9H649 340 aaKnown RBP10.84□□□□□ -0.67
TCF4-243ENST00000569357 C1orf115Q9H7X2 142 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 MKNK2Q9HBH9 465 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 ZSWIM6Q9HCJ5 1215 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 INSL6Q9Y581 213 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 SLC4A4Q9Y6R1 1079 aa10.84□□□□□ -0.67
TCF4-243ENST00000569357 TCRBV5S4A2TA0A5A2 114 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 TMEM232C9JQI7 657 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 H0Y858 1186 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 STXBP3O00186 592 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 NBNO60934 754 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 SNAP25P60880 206 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 ATP8B2P98198 1209 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 PTPN11Q06124 597 aaPredicted RBP10.83□□□□□ -0.68
TCF4-243ENST00000569357 GPNMBQ14956 572 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 SMAD2Q15796 467 aaKnown RBP10.83□□□□□ -0.68
TCF4-243ENST00000569357 TCTN1Q2MV58 587 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
TCF4-243ENST00000569357 ERMP1Q7Z2K6 904 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 MYOCDQ8IZQ8 938 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 LRRC47Q8N1G4 583 aaKnown RBP10.83□□□□□ -0.68
TCF4-243ENST00000569357 SSH3Q8TE77 659 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 FRAT1Q92837 279 aaPredicted RBP10.83□□□□□ -0.68
TCF4-243ENST00000569357 IRF2BPLQ9H1B7 796 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 TLR9Q9NR96 1032 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 TNNQ9UQP3 1299 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 ZNF318Q5VUA4 2279 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 RAD50Q92878 1312 aa10.83□□□□□ -0.68
TCF4-243ENST00000569357 MYH8P13535 1937 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 MBTPS2O43462 519 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 KPNA6O60684 536 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 EFCAB14O75071 495 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 BMP3P12645 472 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 LTBRP36941 435 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 VCPP55072 806 aaKnown RBP10.82□□□□□ -0.68
TCF4-243ENST00000569357 DLX2Q07687 328 aaPredicted RBP10.82□□□□□ -0.68
TCF4-243ENST00000569357 ARSIQ5FYB1 569 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 MUM1L1Q5H9M0 696 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 SLFN13Q68D06 897 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 CTR9Q6PD62 1173 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 ARHGAP45Q92619 1136 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 COPS5Q92905 334 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 IGFLR1Q9H665 355 aa10.82□□□□□ -0.68
TCF4-243ENST00000569357 TET1Q8NFU7 2136 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 MINDY4BA8MYZ0 360 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 H3BNC9 293 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 KDM4AO75164 1064 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 UPP2O95045 317 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 PARNO95453 639 aaKnown RBP10.81□□□□□ -0.68
TCF4-243ENST00000569357 AMHP03971 560 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 CT47B1P0C2W7 299 aaPredicted RBP10.81□□□□□ -0.68
TCF4-243ENST00000569357 FDX1P10109 184 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 TRIM27P14373 513 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 RASA1P20936 1047 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 ID4P47928 161 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 STAT2P52630 851 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 PPP2R5BQ15173 497 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 TKFCQ3LXA3 575 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 GDF6Q6KF10 455 aaPredicted RBP10.81□□□□□ -0.68
TCF4-243ENST00000569357 TMEM192Q8IY95 271 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 CHURC1Q8WUH1 139 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 SAMD11Q96NU1 681 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 YME1L1Q96TA2 773 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 IL1RAPL2Q9NP60 686 aa10.81□□□□□ -0.68
TCF4-243ENST00000569357 CYP39A1Q9NYL5 469 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms