RNA–Protein interactions for RNA: ENST00000568622.1

KIAA0556-208, Transcript of KIAA0556, humanhuman

TSL 2

Gene KIAA0556, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0556-208ENST00000568622 ARHGEF15O94989 841 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 CA3P07451 260 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 MYL3P08590 195 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 CALML3P27482 149 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 DGKHQ86XP1 1220 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 SLC9A7Q96T83 725 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 MTCH2Q9Y6C9 303 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 RAD50Q92878 1312 aa13.09□□□□□ -0.31
KIAA0556-208ENST00000568622 EPOPA6NHQ4 379 aa13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 ZBBXA8MT70 800 aa13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 PDE4DQ08499 809 aa13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 NMIQ13287 307 aaPredicted RBP13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 TMEM67Q5HYA8 995 aa13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 RRP12Q5JTH9 1297 aaKnown RBP13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 DEFB128Q7Z7B8 93 aa13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 ANKS1AQ92625 1134 aa13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 NEDD4P46934 1319 aa13.08□□□□□ -0.32
KIAA0556-208ENST00000568622 TRANK1O15050 2925 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 BAIAP3O94812 1187 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 ACTN1P12814 892 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 HAND2P61296 217 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 GHRHRQ02643 423 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 TAP1Q03518 808 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 BRDTQ58F21 947 aaPredicted RBP13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 TBC1D5Q92609 795 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 KAT2BQ92831 832 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 MPHOSPH6Q99547 160 aaKnown RBP13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 TOMM22Q9NS69 142 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 COL20A1Q9P218 1284 aa13.07□□□□□ -0.32
KIAA0556-208ENST00000568622 TET1Q8NFU7 2136 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 PTPRSQ13332 1948 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 NCOR1O75376 2440 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 B4DLN1 442 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 LPXNO60711 386 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 CXCL10P02778 98 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 MMP3P08254 477 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 BFSP2Q13515 415 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 SYTL5Q8TDW5 730 aaPredicted RBP13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 PPP1R13LQ8WUF5 828 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 DHX38Q92620 1227 aaKnown RBP13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 ESR2Q92731 530 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 OSBPL3Q9H4L5 887 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 RNF41Q9H4P4 317 aaPredicted RBP13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
KIAA0556-208ENST00000568622 PRRC2BQ5JSZ5 2229 aaKnown RBP13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 HAS3O00219 553 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 RFXAPO00287 272 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 TFF2Q03403 129 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 FAM47CQ5HY64 1035 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 GDF6Q6KF10 455 aaPredicted RBP13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 SMC5Q8IY18 1101 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 RETREG2Q8NC44 543 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 AFAP1L1Q8TED9 768 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 AFG1LQ8WV93 481 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 TAAR1Q96RJ0 339 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 ABCB11O95342 1321 aa13.05□□□□□ -0.32
KIAA0556-208ENST00000568622 OPLAHO14841 1288 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 GH1P01241 217 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 SDSP20132 328 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 PTGISQ16647 500 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 LY6KQ17RY6 165 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 AAK1Q2M2I8 961 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 USH1GQ495M9 461 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 SPRED2Q7Z698 418 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 PNMA1Q8ND90 353 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 NECAB3Q96P71 396 aaPredicted RBP13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 ZKSCAN3Q9BRR0 538 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 GTF2IRD1Q9UHL9 959 aa13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
KIAA0556-208ENST00000568622 PARNO95453 639 aaKnown RBP13.03□□□□□ -0.32
KIAA0556-208ENST00000568622 F2P00734 622 aa13.03□□□□□ -0.32
KIAA0556-208ENST00000568622 KCNQ1P51787 676 aa13.03□□□□□ -0.32
KIAA0556-208ENST00000568622 WDR5P61964 334 aaKnown RBP13.03□□□□□ -0.32
KIAA0556-208ENST00000568622 GRB10Q13322 594 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms