RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 KIFC2Q96AC6 838 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 BACH2Q9BYV9 841 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.85
TSC2-223ENST00000568566 ABHD16BQ9H3Z7 469 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 CNNM2Q9H8M5 875 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 ZSWIM6Q9HCJ5 1215 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 ISY1Q9ULR0 285 aaKnown RBP9.77□□□□□ -0.85
TSC2-223ENST00000568566 ASTN1O14525 1302 aa9.77□□□□□ -0.85
TSC2-223ENST00000568566 LRRC37A2A6NM11 1700 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 MYH4Q9Y623 1939 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 ZBBXA8MT70 800 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 ATP2A1O14983 1001 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 ZBED4O75132 1171 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 SNHG28P0DPA3 235 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 BMP3P12645 472 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 CASTP20810 708 aaKnown RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 RPS6KB1P23443 525 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 CNTN2Q02246 1040 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 TRDNQ13061 729 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 TOB2Q14106 344 aaPredicted RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 SKIV2LQ15477 1246 aaKnown RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 CCDC96Q2M329 555 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 IFIT1BQ5T764 474 aaKnown RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 DHX32Q7L7V1 743 aaKnown RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 TLK2Q86UE8 772 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 PRPF38AQ8NAV1 312 aaKnown RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 TTC14Q96N46 770 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 UBAC1Q9BSL1 405 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 NOC4LQ9BVI4 516 aaKnown RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 KATNBL1Q9H079 304 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 TRPV6Q9H1D0 765 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 WNT8AQ9H1J5 351 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 KAT14Q9H8E8 782 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 VAT1LQ9HCJ6 419 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 FAM217BQ9NTX9 383 aaPredicted RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 DDX49Q9Y6V7 483 aaKnown RBP9.76□□□□□ -0.85
TSC2-223ENST00000568566 BRWD1Q9NSI6 2320 aa9.76□□□□□ -0.85
TSC2-223ENST00000568566 MUC6Q6W4X9 2439 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 hCG_1642624A0A1W2PR95 340 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 PLEKHA8P1O95397 391 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 LARGE1O95461 756 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 BMP1P13497 986 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 MCM5P33992 734 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 SLC1A4P43007 532 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 PSMC6P62333 389 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 TNFAIP2Q03169 654 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 ZNF543Q08ER8 600 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 TROAPQ12815 778 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 ITGA7Q13683 1181 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 WTAPQ15007 396 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 FSCN1Q16658 493 aaKnown RBP9.75□□□□□ -0.85
TSC2-223ENST00000568566 RNF20Q5VTR2 975 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 IQCA1Q86XH1 822 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 ZNF654Q8IZM8 581 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 PIBF1Q8WXW3 757 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 BRF1Q92994 677 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 GMCL1Q96IK5 515 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 AGBL1Q96MI9 1066 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 C1QTNF1Q9BXJ1 281 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 SLC38A10Q9HBR0 1119 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 FBXO40Q9UH90 709 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 MAD2L2Q9UI95 211 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 PRR12Q9ULL5 1215 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 SLC4A7Q9Y6M7 1214 aa9.75□□□□□ -0.85
TSC2-223ENST00000568566 RFXAPO00287 272 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 CYTH3O43739 400 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 B4GALT4O60513 344 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 PPP1R11O60927 126 aaPredicted RBP9.74□□□□□ -0.85
TSC2-223ENST00000568566 CABYRO75952 493 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 CD2BP2O95400 341 aaKnown RBP9.74□□□□□ -0.85
TSC2-223ENST00000568566 ATP2A2P16615 1042 aaKnown RBP9.74□□□□□ -0.85
TSC2-223ENST00000568566 CDC27P30260 824 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 GRM4Q14833 912 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 BLOC1S2Q6QNY1 142 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.74□□□□□ -0.85
TSC2-223ENST00000568566 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 SLC43A3Q8NBI5 491 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 CHST13Q8NET6 341 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 SCLYQ96I15 445 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 PURBQ96QR8 312 aaKnown RBP9.74□□□□□ -0.85
TSC2-223ENST00000568566 C22orf23Q9BZE7 217 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 CERS4Q9HA82 394 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 FEM1BQ9UK73 627 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 PCDHA11Q9Y5I1 949 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 ZNF536O15090 1300 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 GRIN2DO15399 1336 aa9.74□□□□□ -0.85
TSC2-223ENST00000568566 KLF18A0A0U1RQI7 1052 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 PALM3A6NDB9 673 aaPredicted RBP9.73□□□□□ -0.85
TSC2-223ENST00000568566 EPOPA6NHQ4 379 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 ADAMTS3O15072 1205 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 DYNC1LI2O43237 492 aaPredicted RBP9.73□□□□□ -0.85
TSC2-223ENST00000568566 CA3P07451 260 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 SMPD1P17405 629 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 AK2P54819 239 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 NKX3-2P78367 333 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 ST3GAL1Q11201 340 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 TTLL4Q14679 1199 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 AAK1Q2M2I8 961 aa9.73□□□□□ -0.85
TSC2-223ENST00000568566 MUM1L1Q5H9M0 696 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms