RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 PRRC2BQ5JSZ5 2229 aaKnown RBP17.66■□□□□ 0.42
COMMD4-223ENST00000568301 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 B4DLN1 442 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 RFXAPO00287 272 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 KPNA6O60684 536 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 EDNRBP24530 442 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 MRPL12P52815 198 aaKnown RBP17.66■□□□□ 0.42
COMMD4-223ENST00000568301 PDE4DQ08499 809 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 SLC30A10Q6XR72 485 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 DEFB128Q7Z7B8 93 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 ESR2Q92731 530 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 MTG1Q9BT17 334 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-223ENST00000568301 TSPYL2Q9H2G4 693 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-223ENST00000568301 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-223ENST00000568301 SCN10AQ9Y5Y9 1956 aa17.66■□□□□ 0.42
COMMD4-223ENST00000568301 PFKMP08237 780 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 SMC5Q8IY18 1101 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 OR6J1Q8NGC5 347 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 SCFD2Q8WU76 684 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 CERS4Q9HA82 394 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 TNKSO95271 1327 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 RAD50Q92878 1312 aa17.65■□□□□ 0.42
COMMD4-223ENST00000568301 A6NJR5 290 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 ZNF213O14771 459 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 CA3P07451 260 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 MYL3P08590 195 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 SDSP20132 328 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 CCDC178Q5BJE1 867 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 TMEM67Q5HYA8 995 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 TBC1D10CQ8IV04 446 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 PPP1R13LQ8WUF5 828 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 MTCH2Q9Y6C9 303 aa17.64■□□□□ 0.41
COMMD4-223ENST00000568301 EPOPA6NHQ4 379 aa17.63■□□□□ 0.41
COMMD4-223ENST00000568301 KCNQ1P51787 676 aa17.63■□□□□ 0.41
COMMD4-223ENST00000568301 PTPN11Q06124 597 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-223ENST00000568301 SKIV2LQ15477 1246 aaKnown RBP17.63■□□□□ 0.41
COMMD4-223ENST00000568301 NFRKBQ6P4R8 1299 aa17.63■□□□□ 0.41
COMMD4-223ENST00000568301 ANKS1AQ92625 1134 aa17.63■□□□□ 0.41
COMMD4-223ENST00000568301 RWDD1Q9H446 243 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-223ENST00000568301 OSBPL3Q9H4L5 887 aa17.63■□□□□ 0.41
COMMD4-223ENST00000568301 TXNP10599 105 aaKnown RBP17.62■□□□□ 0.41
COMMD4-223ENST00000568301 POU3F3P20264 500 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-223ENST00000568301 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
COMMD4-223ENST00000568301 KRT40Q6A162 431 aa17.62■□□□□ 0.41
COMMD4-223ENST00000568301 IQCA1Q86XH1 822 aa17.62■□□□□ 0.41
COMMD4-223ENST00000568301 ZKSCAN3Q9BRR0 538 aa17.62■□□□□ 0.41
COMMD4-223ENST00000568301 MYH6P13533 1939 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 PITPNM1O00562 1244 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 ARHGEF15O94989 841 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 GOLGA8HP0CJ92 632 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 RFC2P35250 354 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 PLA2G5P39877 138 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 FAM47CQ5HY64 1035 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 PLEKHM2Q8IWE5 1019 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 PNMA1Q8ND90 353 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 UBA5Q9GZZ9 404 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 NEDD4P46934 1319 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 LAMA4Q16363 1823 aa17.61■□□□□ 0.41
COMMD4-223ENST00000568301 KDM4AO75164 1064 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 AAK1Q2M2I8 961 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 USH1GQ495M9 461 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 CCDC62Q6P9F0 684 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 CHD1LQ86WJ1 897 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 COPS5Q92905 334 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 KAT14Q9H8E8 782 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 KIAA1217Q5T5P2 1943 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 TRIP12Q14669 1992 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-223ENST00000568301 TET1Q8NFU7 2136 aa17.6■□□□□ 0.41
COMMD4-223ENST00000568301 ABCB11O95342 1321 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 HIP1O00291 1037 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 GTPBP6O43824 516 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-223ENST00000568301 IQCF3P0C7M6 154 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 ACTN1P12814 892 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 NUCB1Q02818 461 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 TAP1Q03518 808 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 CDC37Q16543 378 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-223ENST00000568301 ASPRV1Q53RT3 343 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
COMMD4-223ENST00000568301 MCF2L2Q86YR7 1114 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 ADGRF4Q8IZF3 695 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 RETREG2Q8NC44 543 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 PHOSPHO2Q8TCD6 241 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 NSUN6Q8TEA1 469 aaKnown RBP17.59■□□□□ 0.41
COMMD4-223ENST00000568301 ARNTL2Q8WYA1 636 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 FAM122AQ96E09 287 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 IWS1Q96ST2 819 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 ZSCAN10Q96SZ4 725 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-223ENST00000568301 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 CPVLQ9H3G5 476 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 ZSWIM5Q9P217 1185 aa17.59■□□□□ 0.41
COMMD4-223ENST00000568301 BFSP2Q13515 415 aa17.58■□□□□ 0.4
COMMD4-223ENST00000568301 HERC6Q8IVU3 1022 aa17.58■□□□□ 0.4
COMMD4-223ENST00000568301 SYTL5Q8TDW5 730 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-223ENST00000568301 TBC1D5Q92609 795 aa17.58■□□□□ 0.4
COMMD4-223ENST00000568301 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms