RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 ESRRAP11474 423 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-218ENST00000568153 NPR1P16066 1061 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 ADD2P35612 726 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 NRG1Q02297 640 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-218ENST00000568153 RASGRF1Q13972 1273 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 IKBKEQ14164 716 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 RUFY3Q7L099 469 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 TXNRD3Q86VQ6 643 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 SLC7A3Q8WY07 619 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 JAKMIP1Q96N16 626 aaKnown RBP7.28□□□□□ -1.24
CAPN3-218ENST00000568153 ALDH8A1Q9H2A2 487 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-218ENST00000568153 SLKQ9H2G2 1235 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-218ENST00000568153 CLEC4MQ9H2X3 399 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-218ENST00000568153 SRA1Q9HD15 236 aaKnown RBP7.28□□□□□ -1.24
CAPN3-218ENST00000568153 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 CHMP5Q9NZZ3 219 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 LIMCH1Q9UPQ0 1083 aa7.28□□□□□ -1.24
CAPN3-218ENST00000568153 PNPLA7Q6ZV29 1317 aa7.27□□□□□ -1.24
CAPN3-218ENST00000568153 ZNF532Q9HCE3 1301 aa7.27□□□□□ -1.24
CAPN3-218ENST00000568153 C4BP0C0L5 1744 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 COL5A3P25940 1745 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 H0YIN7 160 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 M0R2C6 588 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 GIPC1O14908 333 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 IGSF3O75054 1194 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 HMGB1P09429 215 aaKnown RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 PDE6AP16499 860 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 CASTP20810 708 aaKnown RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 GPSM2P81274 684 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 DAB2P98082 770 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 PCDH1Q08174 1060 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 ANKRD1Q15327 319 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 ZNF423Q2M1K9 1284 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 VPS53Q5VIR6 699 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 SPTY2D1Q68D10 685 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 FAM117BQ6P1L5 589 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 TMED8Q6PL24 325 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 IGF2-ASQ6U949 168 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 DTHD1Q6ZMT9 781 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 C15orf52Q6ZUT6 534 aaKnown RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 MAP4K3Q8IVH8 894 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 MAGEB6Q8N7X4 407 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 C3orf58Q8NDZ4 430 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 FOXD4L4Q8WXT5 416 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 MASTLQ96GX5 879 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 ZSCAN31Q96LW9 406 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 FRMD6Q96NE9 622 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 UPF3BQ9BZI7 483 aaKnown RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 PUS7LQ9H0K6 701 aaKnown RBP7.27□□□□□ -1.25
CAPN3-218ENST00000568153 RAI14Q9P0K7 980 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 ATP6V0A2Q9Y487 856 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 AK5Q9Y6K8 562 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 MED23Q9ULK4 1368 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 XDHP47989 1333 aa7.27□□□□□ -1.25
CAPN3-218ENST00000568153 TCRBV5S4A2TA0A5A2 114 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 ZNF213O14771 459 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 GPAA1O43292 621 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 FGAP02671 866 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 APPP05067 770 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 SRGNP10124 158 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 ZNF16P17020 682 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 GNAT2P19087 354 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 CYP7A1P22680 504 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 FAAP100Q0VG06 881 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 ALX1Q15699 326 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 IMMTQ16891 758 aaKnown RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 RSPO4Q2I0M5 234 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 ADCK5Q3MIX3 580 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 FOXD4L6Q3SYB3 417 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 NKAPLQ5M9Q1 402 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 BLOC1S2Q6QNY1 142 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 FOXD4L3Q6VB84 417 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 ZNF804AQ7Z570 1209 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 ZGPATQ8N5A5 531 aaKnown RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 WNT8BQ93098 351 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 ZNF622Q969S3 477 aaKnown RBP eCLIP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 KLHDC7BQ96G42 594 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 TMX3Q96JJ7 454 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 TTC14Q96N46 770 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 NEK1Q96PY6 1258 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 STRBPQ96SI9 672 aaKnown RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 SSBP4Q9BWG4 385 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 KCNK4Q9NYG8 393 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 FAM8A1Q9UBU6 413 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 ABCF2Q9UG63 623 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 LY75O60449 1722 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 MAST3O60307 1309 aa7.26□□□□□ -1.25
CAPN3-218ENST00000568153 PDS5AQ29RF7 1337 aaKnown RBP7.26□□□□□ -1.25
CAPN3-218ENST00000568153 SBF2Q86WG5 1849 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 UFL1O94874 794 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 CYP21A2P08686 494 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 USP17L7P0C7H9 530 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 XRCC5P13010 732 aaKnown RBP7.25□□□□□ -1.25
CAPN3-218ENST00000568153 RPS6KB1P23443 525 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 EIF4BP23588 611 aaKnown RBP7.25□□□□□ -1.25
CAPN3-218ENST00000568153 ITGB7P26010 798 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 GSTT1P30711 240 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 PSMD2Q13200 908 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 CUL4AQ13619 759 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 STYK1Q6J9G0 422 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms