RNA–Protein interactions for RNA: ENST00000567742.1

AP000439.4-201, humanhuman

TSL 3 BASIC

Gene AP000439.4, Length 664 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.4-201ENST00000567742 VTA1Q9NP79 307 aa17.44■□□□□ 0.38
AP000439.4-201ENST00000567742 BARHL2Q9NY43 387 aa17.44■□□□□ 0.38
AP000439.4-201ENST00000567742 COL20A1Q9P218 1284 aa17.44■□□□□ 0.38
AP000439.4-201ENST00000567742 ZHX1Q9UKY1 873 aaPredicted RBP17.44■□□□□ 0.38
AP000439.4-201ENST00000567742 ST18O60284 1047 aa17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 TFRCP02786 760 aaKnown RBP17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 EDNRBP24530 442 aa17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 HOXA13P31271 388 aaPredicted RBP17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 ME3Q16798 604 aa17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 CRISPLD2Q9H0B8 497 aa17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 PSTPIP2Q9H939 334 aa17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 PXMP2Q9NR77 195 aa17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 FAM184BQ9ULE4 1060 aa17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 LIMCH1Q9UPQ0 1083 aa17.43■□□□□ 0.38
AP000439.4-201ENST00000567742 STXBP3O00186 592 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 MEIS2O14770 477 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 DEXIO95424 95 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 EN2P19622 333 aaPredicted RBP17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 PKN1Q16512 942 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 LHX8Q68G74 356 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 ANKLE1Q8NAG6 615 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 SHISA4Q96DD7 197 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 KATNBL1Q9H079 304 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 OGDHLQ9ULD0 1010 aa17.42■□□□□ 0.38
AP000439.4-201ENST00000567742 RARBP10826 455 aa17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 STXBP2Q15833 593 aa17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 CCDC144BQ3MJ40 725 aa17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 USP17L6PQ6QN14 398 aa17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 FCHSD1Q86WN1 690 aa17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 RIC8AQ9NPQ8 531 aa17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 SH3GLB2Q9NR46 395 aa17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 STK36Q9NRP7 1315 aa17.41■□□□□ 0.38
AP000439.4-201ENST00000567742 ESYT2A0FGR8 921 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 SMCO2A6NFE2 343 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 LARGE1O95461 756 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 NR3C2P08235 984 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 EIF2AK2P19525 551 aaKnown RBP17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 RGS19P49795 217 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 ADCY7P51828 1080 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 PGM5Q15124 567 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 IQSEC1Q6DN90 963 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 TYW1BQ6NUM6 668 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 EEPD1Q7L9B9 569 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 FBXO16Q8IX29 292 aaPredicted RBP17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 FAM177A1Q8N128 213 aaPredicted RBP17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 PDCD2LQ9BRP1 358 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 EHMT1Q9H9B1 1298 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 C6orf50Q9HD87 102 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 FRMPD4Q14CM0 1322 aa17.4■□□□□ 0.38
AP000439.4-201ENST00000567742 SPDYE3A6NKU9 549 aa17.39■□□□□ 0.37
AP000439.4-201ENST00000567742 PPFIA3O75145 1194 aa17.39■□□□□ 0.37
AP000439.4-201ENST00000567742 DUSP11O75319 330 aaKnown RBP17.39■□□□□ 0.37
AP000439.4-201ENST00000567742 GNA11P29992 359 aa17.39■□□□□ 0.37
AP000439.4-201ENST00000567742 TAPT1Q6NXT6 567 aa17.39■□□□□ 0.37
AP000439.4-201ENST00000567742 ZMYND12Q9H0C1 365 aa17.39■□□□□ 0.37
AP000439.4-201ENST00000567742 BRCA2P51587 3418 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 DOCK5Q9H7D0 1870 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 RBM47A0AV96 593 aaKnown RBP17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 EIF3JO75822 258 aaKnown RBP17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 STAM2O75886 525 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 FOSP01100 380 aaPredicted RBP17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 CCND2P30279 289 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 MCM2P49736 904 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 TNFAIP2Q03169 654 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 UBE2SQ16763 222 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 ANO1Q5XXA6 986 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 MCTP2Q6DN12 878 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 NECAB1Q8N987 351 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 ARRDC4Q8NCT1 418 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 BICD2Q8TD16 824 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 SCFD2Q8WU76 684 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 WASF1Q92558 559 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 XPNPEP3Q9NQH7 507 aa17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 DDX49Q9Y6V7 483 aaKnown RBP17.38■□□□□ 0.37
AP000439.4-201ENST00000567742 FARP2O94887 1054 aaPredicted RBP17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 CTDNEP1O95476 244 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 MYCLP12524 364 aaPredicted RBP17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 XBP1P17861 261 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 ADCYAP1R1P41586 468 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 AP3B2Q13367 1082 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 NSUN7Q8NE18 718 aaKnown RBP17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 PDGFCQ9NRA1 345 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 VPS54Q9P1Q0 977 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 Q9Y3F1 56 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 ALPK3Q96L96 1907 aa17.37■□□□□ 0.37
AP000439.4-201ENST00000567742 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.36■□□□□ 0.37
AP000439.4-201ENST00000567742 DNM1LO00429 736 aa17.36■□□□□ 0.37
AP000439.4-201ENST00000567742 NKRFO15226 690 aaKnown RBP eCLIP17.36■□□□□ 0.37
AP000439.4-201ENST00000567742 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
AP000439.4-201ENST00000567742 TTLL4Q14679 1199 aa17.36■□□□□ 0.37
AP000439.4-201ENST00000567742 DUSP28Q4G0W2 176 aa17.36■□□□□ 0.37
AP000439.4-201ENST00000567742 PCNX4Q63HM2 1172 aa17.36■□□□□ 0.37
AP000439.4-201ENST00000567742 XRRA1Q6P2D8 792 aa17.36■□□□□ 0.37
AP000439.4-201ENST00000567742 RNF180Q86T96 592 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms