RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-231	ENST00000567479	SLC27A2	O14975	620 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	PRC1	O43663	620 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	MYL3	P08590	195 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	MCM5	P33992	734 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	ANTXR2	P58335	489 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	PSMC6	P62333	389 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	CREB3L3	Q68CJ9	461 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	MFSD5	Q6N075	450 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	SEPT14	Q6ZU15	432 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	SKAP1	Q86WV1	359 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	HOMER1	Q86YM7	354 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	SAMD3	Q8N6K7	520 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	MTA3	Q9BTC8	594 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	TBX21	Q9UL17	535 aa		10.91	□□□□□ -0.66
KIFC3-231	ENST00000567479	GRIN2D	O15399	1336 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	PNMA6F	A0A0J9YX94	578 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	CCDC69	A6NI79	296 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	CYTH3	O43739	400 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	KPNA6	O60684	536 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	PPP1R11	O60927	126 aa	Predicted RBP	10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	EIF3J	O75822	258 aa	Known RBP	10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	CD4	P01730	458 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	NR3C2	P08235	984 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	KIF5B	P33176	963 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	HSD17B4	P51659	736 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	EPHB4	P54760	987 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	PURA	Q00577	322 aa	Known RBP	10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	RNF20	Q5VTR2	975 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	CCDC62	Q6P9F0	684 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	NFXL1	Q6ZNB6	911 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	TMEM199	Q8N511	208 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	COPS5	Q92905	334 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	CCDC136	Q96JN2	1154 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	TMEM87B	Q96K49	555 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	MAP3K14	Q99558	947 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	MTG1	Q9BT17	334 aa	Predicted RBP	10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	PPP1R12C	Q9BZL4	782 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	LY9	Q9HBG7	655 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	PXMP2	Q9NR77	195 aa		10.9	□□□□□ -0.66
KIFC3-231	ENST00000567479	LAMA4	Q16363	1823 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479		A6NJR5	290 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	OPLAH	O14841	1288 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	DDAH1	O94760	285 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	ARIH2	O95376	493 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	SUPT20HL2	P0C7V6	817 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	POLR2M	P0CAP2	368 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	EIF2AK2	P19525	551 aa	Known RBP	10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	SMARCA1	P28370	1054 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	GNAQ	P50148	359 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	GHRHR	Q02643	423 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	PPIG	Q13427	754 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	LY6K	Q17RY6	165 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	SLC35G1	Q2M3R5	365 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479		Q7L0L9	218 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	ZNF654	Q8IZM8	581 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	CTCFL	Q8NI51	663 aa	Predicted RBP	10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	PIBF1	Q8WXW3	757 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	RNPC3	Q96LT9	517 aa	Known RBP	10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	LZTS2	Q9BRK4	669 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	TRPV6	Q9H1D0	765 aa		10.89	□□□□□ -0.67
KIFC3-231	ENST00000567479	SH2B2	O14492	632 aa	Predicted RBP	10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	B4GALT4	O60513	344 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	GH1	P01241	217 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	CALM1	P0DP23	149 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	CALM2	P0DP24	149 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	CALM3	P0DP25	149 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	MYCL	P12524	364 aa	Predicted RBP	10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	CSF2RA	P15509	400 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	HOXA13	P31271	388 aa	Predicted RBP	10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	CYP2C18	P33260	490 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	LIFR	P42702	1097 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	SMAD3	P84022	425 aa	Known RBP	10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	RRP36	Q96EU6	259 aa	Known RBP	10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	PDCD2L	Q9BRP1	358 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	MYL10	Q9BUA6	226 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	HIPK3	Q9H422	1215 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	MTMR10	Q9NXD2	777 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	DDX41	Q9UJV9	622 aa	Known RBP	10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	SLC12A7	Q9Y666	1083 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	MCM3AP	O60318	1980 aa		10.88	□□□□□ -0.67
KIFC3-231	ENST00000567479	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	CDC45	O75419	566 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	CAST	P20810	708 aa	Known RBP	10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	LAMC2	Q13753	1193 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	NBPF20	Q3BBV1	942 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	FAM47C	Q5HY64	1035 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	ZNF697	Q5TEC3	545 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	NFRKB	Q6P4R8	1299 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	KCNV1	Q6PIU1	500 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	SYNE3	Q6ZMZ3	975 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	C16orf59	Q7L2K0	433 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	VSIG10L	Q86VR7	867 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	FCHSD1	Q86WN1	690 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	DHX37	Q8IY37	1157 aa	Known RBP	10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	AFG1L	Q8WV93	481 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	NEK1	Q96PY6	1258 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms