RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 CNTN2Q02246 1040 aa23.3■■□□□ 1.32
RNF40-210ENST00000566811 ST3GAL1Q11201 340 aa23.3■■□□□ 1.32
RNF40-210ENST00000566811 MAP3K21Q5TCX8 1036 aa23.3■■□□□ 1.32
RNF40-210ENST00000566811 RMDN3Q96TC7 470 aa23.3■■□□□ 1.32
RNF40-210ENST00000566811 BIN2Q9UBW5 565 aaPredicted RBP23.3■■□□□ 1.32
RNF40-210ENST00000566811 CNPY2Q9Y2B0 182 aa23.3■■□□□ 1.32
RNF40-210ENST00000566811 FRMPD3Q5JV73 1810 aa23.29■■□□□ 1.32
RNF40-210ENST00000566811 SOWAHBA6NEL2 793 aa23.29■■□□□ 1.32
RNF40-210ENST00000566811 SPDYE3A6NKU9 549 aa23.29■■□□□ 1.32
RNF40-210ENST00000566811 CCL14Q16627 93 aa23.29■■□□□ 1.32
RNF40-210ENST00000566811 HABP4Q5JVS0 413 aaKnown RBP23.29■■□□□ 1.32
RNF40-210ENST00000566811 HSCBQ8IWL3 235 aa23.29■■□□□ 1.32
RNF40-210ENST00000566811 ZNF333Q96JL9 665 aa23.29■■□□□ 1.32
RNF40-210ENST00000566811 FGD4Q96M96 766 aa23.29■■□□□ 1.32
RNF40-210ENST00000566811 ABHD16BQ9H3Z7 469 aa23.29■■□□□ 1.32
RNF40-210ENST00000566811 K7ELQ4 463 aaPredicted RBP23.28■■□□□ 1.32
RNF40-210ENST00000566811 MEIS2O14770 477 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 EDNRBP24530 442 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 ARHGEF16Q5VV41 709 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 TYW1BQ6NUM6 668 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 XRRA1Q6P2D8 792 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 ARMCX2Q7L311 632 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 DAGLBQ8NCG7 672 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 PXMP2Q9NR77 195 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 FLRT1Q9NZU1 646 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 RPTORQ8N122 1335 aa23.28■■□□□ 1.32
RNF40-210ENST00000566811 MSCO60682 206 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 STAM2O75886 525 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 PRKAR2AP13861 404 aaKnown RBP23.27■■□□□ 1.32
RNF40-210ENST00000566811 EN2P19622 333 aaPredicted RBP23.27■■□□□ 1.32
RNF40-210ENST00000566811 TRIM29Q14134 588 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 REXO1Q8N1G1 1221 aaKnown RBP23.27■■□□□ 1.32
RNF40-210ENST00000566811 FAM184AQ8NB25 1140 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 SH3TC2Q8TF17 1288 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 ALG1Q9BT22 464 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 VTA1Q9NP79 307 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.27■■□□□ 1.32
RNF40-210ENST00000566811 VPS54Q9P1Q0 977 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 ASTN1O14525 1302 aa23.27■■□□□ 1.32
RNF40-210ENST00000566811 HOXA13P31271 388 aaPredicted RBP23.26■■□□□ 1.31
RNF40-210ENST00000566811 CLK2P49760 499 aaKnown RBP23.26■■□□□ 1.31
RNF40-210ENST00000566811 NLRP5P59047 1200 aa23.26■■□□□ 1.31
RNF40-210ENST00000566811 PDE4DQ08499 809 aa23.26■■□□□ 1.31
RNF40-210ENST00000566811 CUL4AQ13619 759 aa23.26■■□□□ 1.31
RNF40-210ENST00000566811 TBC1D5Q92609 795 aa23.26■■□□□ 1.31
RNF40-210ENST00000566811 BRMS1Q9HCU9 246 aa23.26■■□□□ 1.31
RNF40-210ENST00000566811 HMX1Q9NP08 348 aaPredicted RBP23.26■■□□□ 1.31
RNF40-210ENST00000566811 COL20A1Q9P218 1284 aa23.26■■□□□ 1.31
RNF40-210ENST00000566811 JAK2O60674 1132 aa23.25■■□□□ 1.31
RNF40-210ENST00000566811 CYBAP13498 195 aa23.25■■□□□ 1.31
RNF40-210ENST00000566811 FDPSP14324 419 aaKnown RBP23.25■■□□□ 1.31
RNF40-210ENST00000566811 CYP2C19P33261 490 aa23.25■■□□□ 1.31
RNF40-210ENST00000566811 CACNB2Q08289 660 aaPredicted RBP23.25■■□□□ 1.31
RNF40-210ENST00000566811 USP17L6PQ6QN14 398 aa23.25■■□□□ 1.31
RNF40-210ENST00000566811 INTS4Q96HW7 963 aaKnown RBP23.25■■□□□ 1.31
RNF40-210ENST00000566811 TAAR1Q96RJ0 339 aa23.25■■□□□ 1.31
RNF40-210ENST00000566811 PDCD2LQ9BRP1 358 aa23.25■■□□□ 1.31
RNF40-210ENST00000566811 PHF20Q9BVI0 1012 aa23.25■■□□□ 1.31
RNF40-210ENST00000566811 PCDHA4Q9UN74 947 aa23.25■■□□□ 1.31
RNF40-210ENST00000566811 PPFIA3O75145 1194 aa23.24■■□□□ 1.31
RNF40-210ENST00000566811 CCND2P30279 289 aa23.24■■□□□ 1.31
RNF40-210ENST00000566811 STXBP2Q15833 593 aa23.24■■□□□ 1.31
RNF40-210ENST00000566811 FCHSD1Q86WN1 690 aa23.24■■□□□ 1.31
RNF40-210ENST00000566811 EIF2AK2P19525 551 aaKnown RBP23.23■■□□□ 1.31
RNF40-210ENST00000566811 PGM5Q15124 567 aa23.23■■□□□ 1.31
RNF40-210ENST00000566811 MYH7BA7E2Y1 1941 aa23.23■■□□□ 1.31
RNF40-210ENST00000566811 SEPT4O43236 478 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 SNAI1O95863 264 aaPredicted RBP23.22■■□□□ 1.31
RNF40-210ENST00000566811 NR3C2P08235 984 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 AKR1A1P14550 325 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 ACVR2BQ13705 512 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 UBE2SQ16763 222 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 PCNX4Q63HM2 1172 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 BLIDQ8IZY5 108 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.22■■□□□ 1.31
RNF40-210ENST00000566811 PAK6Q9NQU5 681 aaPredicted RBP23.22■■□□□ 1.31
RNF40-210ENST00000566811 PCDHA6Q9UN73 950 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 SMC3Q9UQE7 1217 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 PCDHA8Q9Y5H6 950 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 BRCA2P51587 3418 aa23.22■■□□□ 1.31
RNF40-210ENST00000566811 EIF3JO75822 258 aaKnown RBP23.21■■□□□ 1.31
RNF40-210ENST00000566811 CCL5P13501 91 aa23.21■■□□□ 1.31
RNF40-210ENST00000566811 GNPTABQ3T906 1256 aa23.21■■□□□ 1.31
RNF40-210ENST00000566811 C8orf76Q96K31 380 aa23.21■■□□□ 1.31
RNF40-210ENST00000566811 AIFM3Q96NN9 605 aa23.21■■□□□ 1.31
RNF40-210ENST00000566811 ANO3Q9BYT9 981 aa23.21■■□□□ 1.31
RNF40-210ENST00000566811 MMP1P03956 469 aa23.2■■□□□ 1.3
RNF40-210ENST00000566811 SREBF1P36956 1147 aa23.2■■□□□ 1.3
RNF40-210ENST00000566811 SAFBQ15424 915 aaKnown RBP eCLIP23.2■■□□□ 1.3
RNF40-210ENST00000566811 KCNV1Q6PIU1 500 aa23.2■■□□□ 1.3
RNF40-210ENST00000566811 VSIG10LQ86VR7 867 aa23.2■■□□□ 1.3
RNF40-210ENST00000566811 PURBQ96QR8 312 aaKnown RBP23.2■■□□□ 1.3
RNF40-210ENST00000566811 TMEM106CQ9BVX2 250 aa23.2■■□□□ 1.3
RNF40-210ENST00000566811 KATNBL1Q9H079 304 aa23.2■■□□□ 1.3
RNF40-210ENST00000566811 ZHX1Q9UKY1 873 aaPredicted RBP23.2■■□□□ 1.3
RNF40-210ENST00000566811 FAM184BQ9ULE4 1060 aa23.2■■□□□ 1.3
RNF40-210ENST00000566811 GJB1P08034 283 aa23.19■■□□□ 1.3
RNF40-210ENST00000566811 ZNF865P0CJ78 1059 aaPredicted RBP23.19■■□□□ 1.3
RNF40-210ENST00000566811 KRT2P35908 639 aa23.19■■□□□ 1.3
RNF40-210ENST00000566811 TRIM32Q13049 653 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms