RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CCNE1P24864 410 aa18.74■□□□□ 0.59
CMTM3-213ENST00000566756 INF2Q27J81 1249 aa18.74■□□□□ 0.59
CMTM3-213ENST00000566756 FIGNQ5HY92 759 aa18.74■□□□□ 0.59
CMTM3-213ENST00000566756 SLC44A5Q8NCS7 719 aa18.74■□□□□ 0.59
CMTM3-213ENST00000566756 RASGRP4Q8TDF6 673 aa18.74■□□□□ 0.59
CMTM3-213ENST00000566756 SLF1Q9BQI6 1058 aa18.74■□□□□ 0.59
CMTM3-213ENST00000566756 TMEM47Q9BQJ4 181 aa18.74■□□□□ 0.59
CMTM3-213ENST00000566756 PSD3Q9NYI0 1048 aa18.74■□□□□ 0.59
CMTM3-213ENST00000566756 PUF60Q9UHX1 559 aaKnown RBP18.74■□□□□ 0.59
CMTM3-213ENST00000566756 OR52Z1P0C646 297 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 GNA11P29992 359 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 CDK17Q00537 523 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 AMPD3Q01432 767 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 HEATR3Q7Z4Q2 680 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 CCDC170Q8IYT3 715 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 TXLNBQ8N3L3 684 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 IDI2Q9BXS1 227 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 TTYH3Q9C0H2 523 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 EXOC1Q9NV70 894 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 SWAP70Q9UH65 585 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 REXO2Q9Y3B8 237 aaKnown RBP18.73■□□□□ 0.59
CMTM3-213ENST00000566756 ESYT2A0FGR8 921 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 TRIM49BA6NDI0 452 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 hCG_1984214I3L0E3 225 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 COBLO75128 1261 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 NOVP48745 357 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 PMS1P54277 932 aaKnown RBP18.73■□□□□ 0.59
CMTM3-213ENST00000566756 PICALMQ13492 652 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 NONOQ15233 471 aaKnown RBP eCLIP18.73■□□□□ 0.59
CMTM3-213ENST00000566756 WDR93Q6P2C0 686 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 CABP7Q86V35 215 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 ZNF713Q8N859 430 aaPredicted RBP18.73■□□□□ 0.59
CMTM3-213ENST00000566756 P2RX5Q93086 422 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 RPGRIP1Q96KN7 1286 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 CHP1Q99653 195 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 C6orf50Q9HD87 102 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 L1RE1Q9UN81 338 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 MAPK8IP1Q9UQF2 711 aa18.73■□□□□ 0.59
CMTM3-213ENST00000566756 ATF5Q9Y2D1 282 aaPredicted RBP18.73■□□□□ 0.59
CMTM3-213ENST00000566756 PLIN4Q96Q06 1357 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 A0A1W2PQJ5 194 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 EIF3JO75822 258 aaKnown RBP18.72■□□□□ 0.59
CMTM3-213ENST00000566756 TRAPPC11Q7Z392 1133 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 TRIM9Q9C026 710 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 KLRF2D3W0D1 207 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 MCM3P25205 808 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 CYLC1P35663 651 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-213ENST00000566756 WDR59Q6PJI9 974 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 ZSCAN29Q8IWY8 852 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-213ENST00000566756 LARGE2Q8N3Y3 721 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 EXOC4Q96A65 974 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 DUSP9Q99956 384 aaKnown RBP18.72■□□□□ 0.59
CMTM3-213ENST00000566756 TUBGCP2Q9BSJ2 902 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 EHD4Q9H223 541 aa18.72■□□□□ 0.59
CMTM3-213ENST00000566756 PP2D1A8MPX8 630 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 VIL1P09327 827 aaKnown RBP18.71■□□□□ 0.59
CMTM3-213ENST00000566756 PLCG1P19174 1290 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 ZBED6P86452 979 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 PAPD7Q5XG87 772 aaKnown RBP18.71■□□□□ 0.59
CMTM3-213ENST00000566756 NEK8Q86SG6 692 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 CSGALNACT2Q8N6G5 542 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 ERGIC2Q96RQ1 377 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 PNKPQ96T60 521 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 SGIP1Q9BQI5 828 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 DHX36Q9H2U1 1008 aaKnown RBP18.71■□□□□ 0.59
CMTM3-213ENST00000566756 ZSWIM4Q9H7M6 989 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 ZNHIT6Q9NWK9 470 aaKnown RBP18.71■□□□□ 0.59
CMTM3-213ENST00000566756 SERPINB13Q9UIV8 391 aa18.71■□□□□ 0.59
CMTM3-213ENST00000566756 EIF3CLB5ME19 914 aaKnown RBP18.7■□□□□ 0.58
CMTM3-213ENST00000566756 POLR3GO15318 223 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-213ENST00000566756 KRT86O43790 486 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 DALRD3Q5D0E6 543 aaKnown RBP18.7■□□□□ 0.58
CMTM3-213ENST00000566756 RSBN1LQ6PCB5 846 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-213ENST00000566756 EIF3CQ99613 913 aaKnown RBP18.7■□□□□ 0.58
CMTM3-213ENST00000566756 CD2APQ9Y5K6 639 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 ABCB11O95342 1321 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 GREB1LQ9C091 1923 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-213ENST00000566756 COL4A5P29400 1685 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 ABL1P00519 1130 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 HLA-DOAP06340 250 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 NAPAP54920 295 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 HERVK_113P62684 666 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 CNNM4Q6P4Q7 775 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 FOXR2Q6PJQ5 311 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 RRP36Q96EU6 259 aaKnown RBP18.7■□□□□ 0.58
CMTM3-213ENST00000566756 STX8Q9UNK0 236 aa18.7■□□□□ 0.58
CMTM3-213ENST00000566756 SIPA1L1O43166 1804 aa18.69■□□□□ 0.58
CMTM3-213ENST00000566756 ANO9A1A5B4 782 aa18.69■□□□□ 0.58
CMTM3-213ENST00000566756 PDE4DQ08499 809 aa18.69■□□□□ 0.58
CMTM3-213ENST00000566756 NFIAQ12857 509 aa18.69■□□□□ 0.58
CMTM3-213ENST00000566756 R3HDM1Q15032 1099 aaKnown RBP18.69■□□□□ 0.58
CMTM3-213ENST00000566756 LRRC15Q8TF66 581 aa18.69■□□□□ 0.58
CMTM3-213ENST00000566756 GMLQ99445 158 aa18.69■□□□□ 0.58
CMTM3-213ENST00000566756 ZNF277Q9NRM2 450 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-213ENST00000566756 STK17AQ9UEE5 414 aa18.69■□□□□ 0.58
CMTM3-213ENST00000566756 COL2A1P02458 1487 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-213ENST00000566756 RBM5P52756 815 aaKnown RBP eCLIP18.68■□□□□ 0.58
CMTM3-213ENST00000566756 CKAP4Q07065 602 aaKnown RBP18.68■□□□□ 0.58
CMTM3-213ENST00000566756 UPF1Q92900 1129 aaKnown RBP eCLIP18.68■□□□□ 0.584e-7■■■■■ 29.7
CMTM3-213ENST00000566756 CNOT6LQ96LI5 555 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms