RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 WNT8AQ9H1J5 351 aa17.52■□□□□ 0.4
RNF40-209ENST00000566703 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.4
RNF40-209ENST00000566703 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.39
RNF40-209ENST00000566703 TNKSO95271 1327 aa17.51■□□□□ 0.39
RNF40-209ENST00000566703 PARP1P09874 1014 aaKnown RBP17.51■□□□□ 0.39
RNF40-209ENST00000566703 CCDC62Q6P9F0 684 aa17.51■□□□□ 0.39
RNF40-209ENST00000566703 SYTL5Q8TDW5 730 aaPredicted RBP17.51■□□□□ 0.39
RNF40-209ENST00000566703 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
RNF40-209ENST00000566703 CXXC1Q9P0U4 656 aaPredicted RBP17.51■□□□□ 0.39
RNF40-209ENST00000566703 LCTP09848 1927 aa17.51■□□□□ 0.39
RNF40-209ENST00000566703 NBPF20Q3BBV1 942 aa17.5■□□□□ 0.39
RNF40-209ENST00000566703 OTOP2Q7RTS6 562 aa17.5■□□□□ 0.39
RNF40-209ENST00000566703 FBXO11Q86XK2 927 aa17.5■□□□□ 0.39
RNF40-209ENST00000566703 SAMD3Q8N6K7 520 aa17.5■□□□□ 0.39
RNF40-209ENST00000566703 TBC1D5Q92609 795 aa17.5■□□□□ 0.39
RNF40-209ENST00000566703 TAAR1Q96RJ0 339 aa17.5■□□□□ 0.39
RNF40-209ENST00000566703 GAS2L1Q99501 681 aaPredicted RBP17.5■□□□□ 0.39
RNF40-209ENST00000566703 CPVLQ9H3G5 476 aa17.5■□□□□ 0.39
RNF40-209ENST00000566703 JMJD4Q9H9V9 463 aa17.5■□□□□ 0.39
RNF40-209ENST00000566703 TRMT13Q9NUP7 481 aaKnown RBP17.5■□□□□ 0.39
RNF40-209ENST00000566703 MAP3K20Q9NYL2 800 aaKnown RBP17.5■□□□□ 0.39
RNF40-209ENST00000566703 RFC2P35250 354 aa17.49■□□□□ 0.39
RNF40-209ENST00000566703 STXBP2Q15833 593 aa17.49■□□□□ 0.39
RNF40-209ENST00000566703 QRICH1Q2TAL8 776 aa17.49■□□□□ 0.39
RNF40-209ENST00000566703 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
RNF40-209ENST00000566703 SYMPKQ92797 1274 aaKnown RBP17.49■□□□□ 0.39
RNF40-209ENST00000566703 COPS5Q92905 334 aa17.49■□□□□ 0.39
RNF40-209ENST00000566703 VWCEQ96DN2 955 aa17.49■□□□□ 0.39
RNF40-209ENST00000566703 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
RNF40-209ENST00000566703 RMDN3Q96TC7 470 aa17.49■□□□□ 0.39
RNF40-209ENST00000566703 SLC4A7Q9Y6M7 1214 aa17.49■□□□□ 0.39
RNF40-209ENST00000566703 PITPNM1O00562 1244 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 EIF3JO75822 258 aaKnown RBP17.48■□□□□ 0.39
RNF40-209ENST00000566703 GH1P01241 217 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 CYP2C9P11712 490 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 GHRHRQ02643 423 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 SEC23AQ15436 765 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 FAM47CQ5HY64 1035 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 IFIT1BQ5T764 474 aaKnown RBP17.48■□□□□ 0.39
RNF40-209ENST00000566703 SCLYQ96I15 445 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 AMNQ9BXJ7 453 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 SLC28A3Q9HAS3 691 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 VAT1LQ9HCJ6 419 aa17.48■□□□□ 0.39
RNF40-209ENST00000566703 DHX16O60231 1041 aaKnown RBP17.47■□□□□ 0.39
RNF40-209ENST00000566703 ARIH2O95376 493 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 ACTN1P12814 892 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 CASTP20810 708 aaKnown RBP17.47■□□□□ 0.39
RNF40-209ENST00000566703 TRDNQ13061 729 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 TRAF1Q13077 416 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 BFSP2Q13515 415 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 SESTD1Q86VW0 696 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 RUFY2Q8WXA3 655 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 MTMR8Q96EF0 704 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 COL20A1Q9P218 1284 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 PCDHA11Q9Y5I1 949 aa17.47■□□□□ 0.39
RNF40-209ENST00000566703 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
RNF40-209ENST00000566703 KLRF2D3W0D1 207 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 NR3C2P08235 984 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 IQCF3P0C7M6 154 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 ARHGAP1Q07960 439 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 ARHGEF16Q5VV41 709 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 SEPT14Q6ZU15 432 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 AFG1LQ8WV93 481 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 NKX2-4Q9H2Z4 354 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 PRDM12Q9H4Q4 367 aa17.46■□□□□ 0.39
RNF40-209ENST00000566703 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
RNF40-209ENST00000566703 ATP2A2P16615 1042 aaKnown RBP17.45■□□□□ 0.38
RNF40-209ENST00000566703 HSD17B4P51659 736 aa17.45■□□□□ 0.38
RNF40-209ENST00000566703 LY6KQ17RY6 165 aa17.45■□□□□ 0.38
RNF40-209ENST00000566703 TTC22Q5TAA0 569 aa17.45■□□□□ 0.38
RNF40-209ENST00000566703 STAG2Q8N3U4 1231 aa17.45■□□□□ 0.38
RNF40-209ENST00000566703 PHOSPHO2Q8TCD6 241 aa17.45■□□□□ 0.38
RNF40-209ENST00000566703 EMID1Q96A84 441 aaPredicted RBP17.45■□□□□ 0.38
RNF40-209ENST00000566703 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
RNF40-209ENST00000566703 YBX2Q9Y2T7 364 aaKnown RBP17.45■□□□□ 0.38
RNF40-209ENST00000566703 SCN10AQ9Y5Y9 1956 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 ZBBXA8MT70 800 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 ZBTB5O15062 677 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 CFBP00751 764 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 MMP3P08254 477 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 PDE4AP27815 886 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 LAMC2Q13753 1193 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 DGKDQ16760 1214 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 KCNV1Q6PIU1 500 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 STOX1Q6ZVD7 989 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 CYB5R4Q7L1T6 521 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 CCDC155Q8N6L0 562 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 CAGE1Q8TC20 777 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 IL25Q9H293 177 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 PXMP2Q9NR77 195 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 MAD2L2Q9UI95 211 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 NOD1Q9Y239 953 aa17.44■□□□□ 0.38
RNF40-209ENST00000566703 OPLAHO14841 1288 aa17.43■□□□□ 0.38
RNF40-209ENST00000566703 PARNO95453 639 aaKnown RBP17.43■□□□□ 0.38
RNF40-209ENST00000566703 GSPT1P15170 499 aaKnown RBP17.43■□□□□ 0.38
RNF40-209ENST00000566703 EIF2AK2P19525 551 aaKnown RBP17.43■□□□□ 0.38
RNF40-209ENST00000566703 ADGRE1Q14246 886 aa17.43■□□□□ 0.38
RNF40-209ENST00000566703 PTGISQ16647 500 aa17.43■□□□□ 0.38
RNF40-209ENST00000566703 TJAP1Q5JTD0 557 aa17.43■□□□□ 0.38
RNF40-209ENST00000566703 DEFB128Q7Z7B8 93 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms