RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 GLT8D2Q9H1C3 349 aa30.07■■■□□ 2.4
NME3-209ENST00000566600 VTA1Q9NP79 307 aa30.07■■■□□ 2.4
NME3-209ENST00000566600 STXBP3O00186 592 aa30.06■■■□□ 2.4
NME3-209ENST00000566600 TFRCP02786 760 aaKnown RBP30.06■■■□□ 2.4
NME3-209ENST00000566600 AKR1A1P14550 325 aa30.06■■■□□ 2.4
NME3-209ENST00000566600 EDNRBP24530 442 aa30.06■■■□□ 2.4
NME3-209ENST00000566600 GTF3C6Q969F1 213 aa30.06■■■□□ 2.4
NME3-209ENST00000566600 ZSCAN31Q96LW9 406 aaPredicted RBP30.06■■■□□ 2.4
NME3-209ENST00000566600 CRISPLD2Q9H0B8 497 aa30.06■■■□□ 2.4
NME3-209ENST00000566600 FAM184BQ9ULE4 1060 aa30.06■■■□□ 2.4
NME3-209ENST00000566600 MCM3APO60318 1980 aa30.06■■■□□ 2.4
NME3-209ENST00000566600 DEXIO95424 95 aa30.05■■■□□ 2.4
NME3-209ENST00000566600 PKN1Q16512 942 aa30.05■■■□□ 2.4
NME3-209ENST00000566600 PXMP2Q9NR77 195 aa30.05■■■□□ 2.4
NME3-209ENST00000566600 MEIS2O14770 477 aa30.04■■■□□ 2.4
NME3-209ENST00000566600 IFFO2Q5TF58 517 aa30.04■■■□□ 2.4
NME3-209ENST00000566600 LHX8Q68G74 356 aa30.04■■■□□ 2.4
NME3-209ENST00000566600 FCHSD1Q86WN1 690 aa30.04■■■□□ 2.4
NME3-209ENST00000566600 KATNBL1Q9H079 304 aa30.04■■■□□ 2.4
NME3-209ENST00000566600 RIC8AQ9NPQ8 531 aa30.04■■■□□ 2.4
NME3-209ENST00000566600 EN2P19622 333 aaPredicted RBP30.03■■■□□ 2.4
NME3-209ENST00000566600 ADCY7P51828 1080 aa30.03■■■□□ 2.4
NME3-209ENST00000566600 USP17L6PQ6QN14 398 aa30.03■■■□□ 2.4
NME3-209ENST00000566600 OGDHLQ9ULD0 1010 aa30.03■■■□□ 2.4
NME3-209ENST00000566600 SMCO2A6NFE2 343 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 PPFIA3O75145 1194 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 LARGE1O95461 756 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 RARBP10826 455 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 EIF2AK2P19525 551 aaKnown RBP30.02■■■□□ 2.4
NME3-209ENST00000566600 STXBP2Q15833 593 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 CCDC144BQ3MJ40 725 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 TYW1BQ6NUM6 668 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 NECAB1Q8N987 351 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 CCDC148Q8NFR7 591 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 SH3GLB2Q9NR46 395 aa30.02■■■□□ 2.4
NME3-209ENST00000566600 SH2B1Q9NRF2 756 aaPredicted RBP30.02■■■□□ 2.4
NME3-209ENST00000566600 STK36Q9NRP7 1315 aa30.01■■■□□ 2.4
NME3-209ENST00000566600 ESYT2A0FGR8 921 aa30.01■■■□□ 2.39
NME3-209ENST00000566600 EEPD1Q7L9B9 569 aa30.01■■■□□ 2.39
NME3-209ENST00000566600 FAM177A1Q8N128 213 aaPredicted RBP30.01■■■□□ 2.39
NME3-209ENST00000566600 ANKLE1Q8NAG6 615 aa30.01■■■□□ 2.39
NME3-209ENST00000566600 SHISA4Q96DD7 197 aa30.01■■■□□ 2.39
NME3-209ENST00000566600 PDCD2LQ9BRP1 358 aa30.01■■■□□ 2.39
NME3-209ENST00000566600 DDX49Q9Y6V7 483 aaKnown RBP30.01■■■□□ 2.39
NME3-209ENST00000566600 LRRC37A2A6NM11 1700 aa30■■■□□ 2.39
NME3-209ENST00000566600 NR3C2P08235 984 aa30■■■□□ 2.39
NME3-209ENST00000566600 IQSEC1Q6DN90 963 aa30■■■□□ 2.39
NME3-209ENST00000566600 FBXO16Q8IX29 292 aaPredicted RBP30■■■□□ 2.39
NME3-209ENST00000566600 C6orf50Q9HD87 102 aa30■■■□□ 2.39
NME3-209ENST00000566600 SPDYE3A6NKU9 549 aa29.99■■■□□ 2.39
NME3-209ENST00000566600 GNA11P29992 359 aa29.99■■■□□ 2.39
NME3-209ENST00000566600 MCM2P49736 904 aa29.99■■■□□ 2.39
NME3-209ENST00000566600 TAPT1Q6NXT6 567 aa29.99■■■□□ 2.39
NME3-209ENST00000566600 WASF1Q92558 559 aa29.99■■■□□ 2.39
NME3-209ENST00000566600 ZMYND12Q9H0C1 365 aa29.99■■■□□ 2.39
NME3-209ENST00000566600 EHMT1Q9H9B1 1298 aa29.99■■■□□ 2.39
NME3-209ENST00000566600 FRMPD4Q14CM0 1322 aa29.98■■■□□ 2.39
NME3-209ENST00000566600 EIF3JO75822 258 aaKnown RBP29.98■■■□□ 2.39
NME3-209ENST00000566600 FOSP01100 380 aaPredicted RBP29.98■■■□□ 2.39
NME3-209ENST00000566600 CCND2P30279 289 aa29.98■■■□□ 2.39
NME3-209ENST00000566600 TNFAIP2Q03169 654 aa29.98■■■□□ 2.39
NME3-209ENST00000566600 PGM5Q15124 567 aa29.98■■■□□ 2.39
NME3-209ENST00000566600 MCTP2Q6DN12 878 aa29.98■■■□□ 2.39
NME3-209ENST00000566600 ARRDC4Q8NCT1 418 aa29.98■■■□□ 2.39
NME3-209ENST00000566600 DUSP11O75319 330 aaKnown RBP29.97■■■□□ 2.39
NME3-209ENST00000566600 CTDNEP1O95476 244 aa29.97■■■□□ 2.39
NME3-209ENST00000566600 RGS19P49795 217 aa29.97■■■□□ 2.39
NME3-209ENST00000566600 UBE2SQ16763 222 aa29.97■■■□□ 2.39
NME3-209ENST00000566600 VSIG10LQ86VR7 867 aa29.97■■■□□ 2.39
NME3-209ENST00000566600 BICD2Q8TD16 824 aa29.97■■■□□ 2.39
NME3-209ENST00000566600 SCFD2Q8WU76 684 aa29.97■■■□□ 2.39
NME3-209ENST00000566600 XPNPEP3Q9NQH7 507 aa29.97■■■□□ 2.39
NME3-209ENST00000566600 FRMPD3Q5JV73 1810 aa29.96■■■□□ 2.39
NME3-209ENST00000566600 RBM47A0AV96 593 aaKnown RBP29.96■■■□□ 2.39
NME3-209ENST00000566600 MYCLP12524 364 aaPredicted RBP29.96■■■□□ 2.39
NME3-209ENST00000566600 XBP1P17861 261 aa29.96■■■□□ 2.39
NME3-209ENST00000566600 ADCYAP1R1P41586 468 aa29.96■■■□□ 2.39
NME3-209ENST00000566600 ANO1Q5XXA6 986 aa29.96■■■□□ 2.39
NME3-209ENST00000566600 XRRA1Q6P2D8 792 aa29.96■■■□□ 2.39
NME3-209ENST00000566600 PDGFCQ9NRA1 345 aa29.96■■■□□ 2.39
NME3-209ENST00000566600 VPS54Q9P1Q0 977 aa29.96■■■□□ 2.39
NME3-209ENST00000566600 ORC3Q9UBD5 711 aaPredicted RBP29.96■■■□□ 2.39
NME3-209ENST00000566600 STAM2O75886 525 aa29.95■■■□□ 2.39
NME3-209ENST00000566600 AP3B2Q13367 1082 aa29.95■■■□□ 2.39
NME3-209ENST00000566600 NSUN7Q8NE18 718 aaKnown RBP29.95■■■□□ 2.39
NME3-209ENST00000566600 LLPHQ9BRT6 129 aaKnown RBP29.95■■■□□ 2.39
NME3-209ENST00000566600 SPC25Q9HBM1 224 aa29.95■■■□□ 2.39
NME3-209ENST00000566600 PCDHA6Q9UN73 950 aa29.95■■■□□ 2.39
NME3-209ENST00000566600 PCDHA8Q9Y5H6 950 aa29.95■■■□□ 2.39
NME3-209ENST00000566600 FARP2O94887 1054 aaPredicted RBP29.94■■■□□ 2.38
NME3-209ENST00000566600 WDR11Q9BZH6 1224 aa29.94■■■□□ 2.38
NME3-209ENST00000566600 NLRP5P59047 1200 aa29.93■■■□□ 2.38
NME3-209ENST00000566600 TTLL4Q14679 1199 aa29.93■■■□□ 2.38
NME3-209ENST00000566600 PCNX4Q63HM2 1172 aa29.93■■■□□ 2.38
NME3-209ENST00000566600 RNF180Q86T96 592 aa29.93■■■□□ 2.38
NME3-209ENST00000566600 CCDC83Q8IWF9 413 aa29.93■■■□□ 2.38
NME3-209ENST00000566600 REXO1Q8N1G1 1221 aaKnown RBP29.93■■■□□ 2.38
NME3-209ENST00000566600 Q9Y3F1 56 aa29.93■■■□□ 2.38
NME3-209ENST00000566600 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.92■■■□□ 2.38
NME3-209ENST00000566600 NKRFO15226 690 aaKnown RBP eCLIP29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms