RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SKOR1P84550 965 aa23.99■■□□□ 1.43
SPSB3-208ENST00000566339 MAPK8IP2Q13387 824 aaPredicted RBP23.99■■□□□ 1.43
SPSB3-208ENST00000566339 MAN2A1Q16706 1144 aa23.99■■□□□ 1.43
SPSB3-208ENST00000566339 VWA3BQ502W6 1294 aa23.99■■□□□ 1.43
SPSB3-208ENST00000566339 SLC10A5Q5PT55 438 aa23.99■■□□□ 1.43
SPSB3-208ENST00000566339 C1orf131Q8NDD1 294 aaKnown RBP23.99■■□□□ 1.43
SPSB3-208ENST00000566339 PCMTD1Q96MG8 357 aaPredicted RBP23.99■■□□□ 1.43
SPSB3-208ENST00000566339 SPZ1Q9BXG8 430 aa23.99■■□□□ 1.43
SPSB3-208ENST00000566339 IFIH1Q9BYX4 1025 aaKnown RBP23.99■■□□□ 1.43
SPSB3-208ENST00000566339 ANKRD2Q9GZV1 360 aa23.99■■□□□ 1.43
SPSB3-208ENST00000566339 MYH1P12882 1939 aa23.99■■□□□ 1.43
SPSB3-208ENST00000566339 PLSCR1O15162 318 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 PLCG1P19174 1290 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 LRRC63Q05C16 580 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 FAM47AQ5JRC9 791 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 SPATS2Q86XZ4 545 aaKnown RBP23.98■■□□□ 1.43
SPSB3-208ENST00000566339 CERS3Q8IU89 383 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 SPATA4Q8NEY3 305 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 MAD2L2Q9UI95 211 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 SIK3Q9Y2K2 1263 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 GNA11P29992 359 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 CCDC96Q2M329 555 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 SYN2Q92777 582 aaPredicted RBP23.98■■□□□ 1.43
SPSB3-208ENST00000566339 CALML4Q96GE6 196 aa23.98■■□□□ 1.43
SPSB3-208ENST00000566339 LUC7LQ9NQ29 371 aaKnown RBP23.98■■□□□ 1.43
SPSB3-208ENST00000566339 CCDC88AQ3V6T2 1871 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 PALM3A6NDB9 673 aaPredicted RBP23.97■■□□□ 1.43
SPSB3-208ENST00000566339 hCG_1984214I3L0E3 225 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 NMT2O60551 498 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 ASIC1P78348 528 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 PSMD2Q13200 908 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 NONOQ15233 471 aaKnown RBP eCLIP23.97■■□□□ 1.43
SPSB3-208ENST00000566339 C12orf60Q5U649 245 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 FOXR1Q6PIV2 292 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 GUF1Q8N442 669 aaKnown RBP23.97■■□□□ 1.43
SPSB3-208ENST00000566339 ZNF713Q8N859 430 aaPredicted RBP23.97■■□□□ 1.43
SPSB3-208ENST00000566339 IPO4Q8TEX9 1081 aaKnown RBP23.97■■□□□ 1.43
SPSB3-208ENST00000566339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.97■■□□□ 1.431e-10■■■■□ 24.5
SPSB3-208ENST00000566339 OSBPL9Q96SU4 736 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 LRWD1Q9UFC0 647 aa23.97■■□□□ 1.43
SPSB3-208ENST00000566339 VEGFAP15692 232 aaPredicted RBP23.96■■□□□ 1.43
SPSB3-208ENST00000566339 IRAK1P51617 712 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 KIF11P52732 1056 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 INF2Q27J81 1249 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 EMC10Q5UCC4 262 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 UNC13DQ70J99 1090 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 ESYT2A0FGR8 921 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 RBAK-RBAKDNI3L0D1 243 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 ZNF263O14978 683 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 ADAMTS3O15072 1205 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 TFAP4Q01664 338 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 C2orf54Q08AI8 447 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 PROM2Q8N271 834 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 CAPS2Q9BXY5 557 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 NDST4Q9H3R1 872 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 ZNF287Q9HBT7 754 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 C6orf50Q9HD87 102 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 RIC8AQ9NPQ8 531 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 STIM2Q9P246 746 aa23.96■■□□□ 1.43
SPSB3-208ENST00000566339 SHTN1A0MZ66 631 aa23.95■■□□□ 1.42
SPSB3-208ENST00000566339 MACROD2A1Z1Q3 448 aa23.95■■□□□ 1.42
SPSB3-208ENST00000566339 SRRM3A6NNA2 597 aaPredicted RBP23.95■■□□□ 1.42
SPSB3-208ENST00000566339 EBAG9O00559 213 aa23.95■■□□□ 1.42
SPSB3-208ENST00000566339 STK4Q13043 487 aa23.95■■□□□ 1.42
SPSB3-208ENST00000566339 TADA2BQ86TJ2 420 aa23.95■■□□□ 1.42
SPSB3-208ENST00000566339 EIF1ADQ8N9N8 165 aaKnown RBP23.95■■□□□ 1.42
SPSB3-208ENST00000566339 GPKOWQ92917 476 aaPredicted RBP eCLIP23.95■■□□□ 1.42
SPSB3-208ENST00000566339 ARHGAP20Q9P2F6 1191 aa23.95■■□□□ 1.42
SPSB3-208ENST00000566339 NHSQ6T4R5 1651 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 GRID2IPA4D2P6 1211 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 PP2D1A8MPX8 630 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 EIF3HO15372 352 aaKnown RBP eCLIP23.94■■□□□ 1.42
SPSB3-208ENST00000566339 ZEB2O60315 1214 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 HSF2BPO75031 334 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 MYBL2P10244 700 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 HIBADHP31937 336 aaKnown RBP23.94■■□□□ 1.42
SPSB3-208ENST00000566339 CCDC181Q5TID7 509 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 TYW1BQ6NUM6 668 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 C3orf67Q6ZVT6 689 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 SND1Q7KZF4 910 aaKnown RBP eCLIP23.94■■□□□ 1.42
SPSB3-208ENST00000566339 SV2BQ7L1I2 683 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 NEK8Q86SG6 692 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 SUGP1Q8IWZ8 645 aaKnown RBP23.94■■□□□ 1.42
SPSB3-208ENST00000566339 MREGQ8N565 214 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 IL17RBQ9NRM6 502 aa23.94■■□□□ 1.42
SPSB3-208ENST00000566339 ZNF185O15231 689 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 SEPT2Q15019 361 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 TXNRD1Q16881 649 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 ERFEQ4G0M1 354 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 POTEDQ86YR6 584 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 RUFY1Q96T51 708 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 DEF6Q9H4E7 631 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 RNF216Q9NWF9 866 aaPredicted RBP23.93■■□□□ 1.42
SPSB3-208ENST00000566339 ASTE1Q2TB18 679 aaPredicted RBP23.93■■□□□ 1.42
SPSB3-208ENST00000566339 ICE2Q659A1 982 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 CD302Q8IX05 232 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 IFT20Q8IY31 132 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 NOX5Q96PH1 765 aa23.93■■□□□ 1.42
SPSB3-208ENST00000566339 AKR1B10O60218 316 aa23.92■■□□□ 1.42
SPSB3-208ENST00000566339 MAGEA1P43355 309 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms