RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SLAIN1Q8ND83 568 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 RAET1EQ8TD07 263 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 RASGRP4Q8TDF6 673 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 MORC4Q8TE76 937 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 CCDC12Q8WUD4 166 aaPredicted RBP9.38□□□□□ -0.91
CDH13-208ENST00000566333 TNFRSF25Q93038 417 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
CDH13-208ENST00000566333 TAAR1Q96RJ0 339 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 MCOLN1Q9GZU1 580 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 KATNBL1Q9H079 304 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 PXMP2Q9NR77 195 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 TMEM260Q9NX78 707 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 MAP3K20Q9NYL2 800 aaKnown RBP9.38□□□□□ -0.91
CDH13-208ENST00000566333 KCNJ14Q9UNX9 436 aa9.38□□□□□ -0.91
CDH13-208ENST00000566333 MMP1P03956 469 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 INHAP05111 366 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 CYBAP13498 195 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 EIF2AK2P19525 551 aaKnown RBP9.37□□□□□ -0.91
CDH13-208ENST00000566333 CYP2C19P33261 490 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 PKN2Q16513 984 aaKnown RBP9.37□□□□□ -0.91
CDH13-208ENST00000566333 KRT40Q6A162 431 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 ARMCX2Q7L311 632 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 FCHSD1Q86WN1 690 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 REXO1Q8N1G1 1221 aaKnown RBP9.37□□□□□ -0.91
CDH13-208ENST00000566333 TRPV1Q8NER1 839 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 DNERQ8NFT8 737 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 SH3TC2Q8TF17 1288 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 CRYGNQ8WXF5 182 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 WASF1Q92558 559 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 PGBD1Q96JS3 809 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 RMDN3Q96TC7 470 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 PDCD2LQ9BRP1 358 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 TINF2Q9BSI4 451 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 ANO3Q9BYT9 981 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 PCDHA4Q9UN74 947 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 TCHHQ07283 1943 aa9.37□□□□□ -0.91
CDH13-208ENST00000566333 LOC102724159A0A0B4J2E5 919 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 FAM205CA6NFA0 338 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 ADCY6O43306 1168 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 EDIL3O43854 480 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 SNAI1O95863 264 aaPredicted RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 GRK4P32298 578 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 SREBF1P36956 1147 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 NLRP5P59047 1200 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 UBXN2AP68543 259 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 AP3B2Q13367 1082 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 PGM5Q15124 567 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 PWP2Q15269 919 aaKnown RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 COL13A1Q5TAT6 717 aaPredicted RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 FBXO16Q8IX29 292 aaPredicted RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 TRMT44Q8IYL2 757 aaKnown RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 MSL3Q8N5Y2 521 aaKnown RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 ARMC5Q96C12 935 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 ZNF333Q96JL9 665 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 C8orf76Q96K31 380 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 GLT8D2Q9H1C3 349 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 C6orf50Q9HD87 102 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 SLC5A4Q9NY91 659 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 PCDHA6Q9UN73 950 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 SMC3Q9UQE7 1217 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.36□□□□□ -0.91
CDH13-208ENST00000566333 PCDHA8Q9Y5H6 950 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 ALPK3Q96L96 1907 aa9.36□□□□□ -0.91
CDH13-208ENST00000566333 ASB14A6NK59 587 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 KIF28PB7ZC32 967 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 RGS20O76081 388 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 ZNF865P0CJ78 1059 aaPredicted RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 PRKAR2AP13861 404 aaKnown RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 GNA11P29992 359 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 MRPL12P52815 198 aaKnown RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 MRPS9P82933 396 aaKnown RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 CACNB2Q08289 660 aaPredicted RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 NR5A1Q13285 461 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 SLC9C1Q4G0N8 1177 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 EARS2Q5JPH6 523 aaKnown RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 JAKMIP3Q5VZ66 844 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 PCNX4Q63HM2 1172 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 GALNT17Q6IS24 598 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 DIS3L2Q8IYB7 885 aaKnown RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 BLIDQ8IZY5 108 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 FAM184AQ8NB25 1140 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 BICD2Q8TD16 824 aa9.35□□□□□ -0.91
CDH13-208ENST00000566333 NSUN6Q8TEA1 469 aaKnown RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 ADD3Q9UEY8 706 aaKnown RBP9.35□□□□□ -0.91
CDH13-208ENST00000566333 MYH9P35579 1960 aaKnown RBP9.34□□□□□ -0.91
CDH13-208ENST00000566333 SCN10AQ9Y5Y9 1956 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 SPDYE3A6NKU9 549 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 BTBD18B2RXH4 712 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 WNT7AO00755 349 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 FOSP01100 380 aaPredicted RBP9.34□□□□□ -0.91
CDH13-208ENST00000566333 NR3C2P08235 984 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 XBP1P17861 261 aa9.34□□□□□ -0.91
CDH13-208ENST00000566333 CCND3P30281 292 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms