RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SLC16A11Q8NCK7 471 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 SORCS2Q96PQ0 1159 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 CRBNQ96SW2 442 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 HAUS7Q99871 368 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 AP5M1Q9H0R1 490 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 GULP1Q9UBP9 304 aa4.24□□□□□ -1.73
SMG1-212ENST00000566328 STXBP3O00186 592 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 CBFA2T2O43439 604 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 THBS2P35442 1172 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 AMPD2Q01433 879 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 GRB10Q13322 594 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 COL9A2Q14055 689 aaPredicted RBP4.23□□□□□ -1.73
SMG1-212ENST00000566328 ZYXQ15942 572 aaKnown RBP4.23□□□□□ -1.73
SMG1-212ENST00000566328 GNPTABQ3T906 1256 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 ETV3LQ6ZN32 361 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 KYQ8NBH2 561 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 TMEM87AQ8NBN3 555 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 ADCY4Q8NFM4 1077 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 KISS1RQ969F8 398 aaPredicted RBP4.23□□□□□ -1.73
SMG1-212ENST00000566328 CDK5RAP1Q96SZ6 601 aaKnown RBP4.23□□□□□ -1.73
SMG1-212ENST00000566328 MTA3Q9BTC8 594 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 C11orf84Q9BUA3 381 aaPredicted RBP4.23□□□□□ -1.73
SMG1-212ENST00000566328 KRTAP3-1Q9BYR8 98 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 PHAXQ9H814 394 aaKnown RBP4.23□□□□□ -1.73
SMG1-212ENST00000566328 NGRNQ9NPE2 291 aaKnown RBP4.23□□□□□ -1.73
SMG1-212ENST00000566328 INVSQ9Y283 1065 aa4.23□□□□□ -1.73
SMG1-212ENST00000566328 NTRK1P04629 796 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 HMGA2P52926 109 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 DPY19L1Q2PZI1 675 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 RUFY4Q6ZNE9 571 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 USP51Q70EK9 711 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 PLEKHH3Q7Z736 793 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 CPNE8Q86YQ8 564 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 GIPC2Q8TF65 315 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 RCC1LQ96I51 464 aaKnown RBP4.22□□□□□ -1.73
SMG1-212ENST00000566328 GORASP1Q9BQQ3 440 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 PPT2Q9UMR5 302 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 TIMELESSQ9UNS1 1208 aa4.22□□□□□ -1.73
SMG1-212ENST00000566328 C7orf72A4D263 438 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 CYR61O00622 381 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 PPP1R11O60927 126 aaPredicted RBP4.21□□□□□ -1.74
SMG1-212ENST00000566328 VAMP4O75379 141 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 FUCA1P04066 466 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 C8BP07358 591 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 C6P13671 934 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 TACR2P21452 398 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 ZNF76P36508 570 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 SLC7A5Q01650 507 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 MCTP2Q6DN12 878 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 CD300LDQ6UXZ3 194 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 LCORQ96JN0 433 aaPredicted RBP4.21□□□□□ -1.74
SMG1-212ENST00000566328 MCMBPQ9BTE3 642 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 KLHL25Q9H0H3 589 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 FBLN5Q9UBX5 448 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 SUGT1Q9Y2Z0 365 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 TSC22D4Q9Y3Q8 395 aa4.21□□□□□ -1.74
SMG1-212ENST00000566328 C9orf118A6NHY6 69 aa4.2□□□□□ -1.74
SMG1-212ENST00000566328 ARHGEF39Q8N4T4 335 aa4.2□□□□□ -1.74
SMG1-212ENST00000566328 TXNDC5Q8NBS9 432 aaKnown RBP4.2□□□□□ -1.74
SMG1-212ENST00000566328 SH3RF3Q8TEJ3 882 aaPredicted RBP4.2□□□□□ -1.74
SMG1-212ENST00000566328 SEC14L1Q92503 715 aa4.2□□□□□ -1.74
SMG1-212ENST00000566328 SPATA32Q96LK8 384 aa4.2□□□□□ -1.74
SMG1-212ENST00000566328 CGGBP1Q9UFW8 167 aaPredicted RBP4.2□□□□□ -1.74
SMG1-212ENST00000566328 LTBP3Q9NS15 1303 aa4.2□□□□□ -1.74
SMG1-212ENST00000566328 LAMTOR5O43504 91 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 FZD7O75084 574 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 CYP7B1O75881 506 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 EPHX1P07099 455 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 POMZP3Q6PJE2 187 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 MIB1Q86YT6 1006 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 CRACR2BQ8N4Y2 399 aaPredicted RBP4.19□□□□□ -1.74
SMG1-212ENST00000566328 C19orf47Q8N9M1 422 aaKnown RBP4.19□□□□□ -1.74
SMG1-212ENST00000566328 OR6P1Q8NGX9 317 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 PLEKHO2Q8TD55 490 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 FGD4Q96M96 766 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 MMP19Q99542 508 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 YIPF4Q9BSR8 244 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 SSBP3Q9BWW4 388 aaPredicted RBP4.19□□□□□ -1.74
SMG1-212ENST00000566328 METTL5Q9NRN9 209 aaKnown RBP4.19□□□□□ -1.74
SMG1-212ENST00000566328 ST6GALNAC2Q9UJ37 374 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 SIT1Q9Y3P8 196 aa4.19□□□□□ -1.74
SMG1-212ENST00000566328 NPEPPSL1A6NEC2 478 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 DDX3XO00571 662 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMG1-212ENST00000566328 CYP1A1P04798 512 aaPredicted RBP4.18□□□□□ -1.74
SMG1-212ENST00000566328 SLC6A11P48066 632 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 ITGA1P56199 1179 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 EIF6P56537 245 aaKnown RBP4.18□□□□□ -1.74
SMG1-212ENST00000566328 NKX3-2P78367 333 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 MROH9Q5TGP6 573 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 PRAMEF18Q5VWM3 479 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 C9orf131Q5VYM1 1079 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 LIMS2Q7Z4I7 341 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 MILR1Q7Z6M3 343 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 MRIQ9BWK5 157 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 MARCH2Q9P0N8 246 aa4.18□□□□□ -1.74
SMG1-212ENST00000566328 ANKRD34BA5PLL1 514 aa4.17□□□□□ -1.74
SMG1-212ENST00000566328 C22orf46C9J442 243 aa4.17□□□□□ -1.74
SMG1-212ENST00000566328 SGSM2O43147 1006 aa4.17□□□□□ -1.74
SMG1-212ENST00000566328 PLS3P13797 630 aa4.17□□□□□ -1.74
SMG1-212ENST00000566328 PRR31Q5SQ13 230 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms