RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 ZSWIM6Q9HCJ5 1215 aa21.6■■□□□ 1.05
CMTM3-210ENST00000565666 PHF24Q9UPV7 400 aa21.6■■□□□ 1.05
CMTM3-210ENST00000565666 CNTNAP5Q8WYK1 1306 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 MKI67P46013 3256 aaKnown RBP21.59■■□□□ 1.05
CMTM3-210ENST00000565666 MYADML2A6NDP7 307 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 STXBP2Q15833 593 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 GNASQ5JWF2 1037 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 FCHSD1Q86WN1 690 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 PCSK9Q8NBP7 692 aaKnown RBP21.59■■□□□ 1.05
CMTM3-210ENST00000565666 KLHDC9Q8NEP7 349 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 CUL5Q93034 780 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 WDR11Q9BZH6 1224 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 TM6SF1Q9BZW5 370 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 PXMP2Q9NR77 195 aa21.59■■□□□ 1.05
CMTM3-210ENST00000565666 GNEQ9Y223 722 aaKnown RBP21.59■■□□□ 1.05
CMTM3-210ENST00000565666 CCDC196A0A1B0GTZ2 297 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 DYNC1LI2O43237 492 aaPredicted RBP21.58■■□□□ 1.05
CMTM3-210ENST00000565666 CST5P28325 142 aaPredicted RBP21.58■■□□□ 1.05
CMTM3-210ENST00000565666 ACLYP53396 1101 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 IRX5P78411 483 aaPredicted RBP21.58■■□□□ 1.05
CMTM3-210ENST00000565666 PPP2R5BQ15173 497 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 KCNA10Q16322 511 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 DUSP28Q4G0W2 176 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 SLC39A5Q6ZMH5 540 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 HEATR3Q7Z4Q2 680 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 FBXL16Q8N461 479 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 SMARCC2Q8TAQ2 1214 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 SCFD2Q8WU76 684 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 AGXT2Q9BYV1 514 aa21.58■■□□□ 1.05
CMTM3-210ENST00000565666 UPF3BQ9BZI7 483 aaKnown RBP21.58■■□□□ 1.05
CMTM3-210ENST00000565666 A0A1W2PQ45 241 aaPredicted RBP21.57■■□□□ 1.04
CMTM3-210ENST00000565666 A0A1W2PQY0 241 aa21.57■■□□□ 1.04
CMTM3-210ENST00000565666 MOXD2PA6NHM9 499 aa21.57■■□□□ 1.04
CMTM3-210ENST00000565666 NR3C2P08235 984 aa21.57■■□□□ 1.04
CMTM3-210ENST00000565666 CDC27P30260 824 aa21.57■■□□□ 1.04
CMTM3-210ENST00000565666 BEX3Q00994 111 aa21.57■■□□□ 1.04
CMTM3-210ENST00000565666 TMEM63BQ5T3F8 832 aa21.57■■□□□ 1.04
CMTM3-210ENST00000565666 ATP11BQ9Y2G3 1177 aa21.57■■□□□ 1.04
CMTM3-210ENST00000565666 Q9Y3F1 56 aa21.57■■□□□ 1.04
CMTM3-210ENST00000565666 RBM47A0AV96 593 aaKnown RBP21.56■■□□□ 1.04
CMTM3-210ENST00000565666 ASGR1P07306 291 aa21.56■■□□□ 1.04
CMTM3-210ENST00000565666 MYCLP12524 364 aaPredicted RBP21.56■■□□□ 1.04
CMTM3-210ENST00000565666 PTGS1P23219 599 aa21.56■■□□□ 1.04
CMTM3-210ENST00000565666 RTP1P59025 263 aa21.56■■□□□ 1.04
CMTM3-210ENST00000565666 TTLL4Q14679 1199 aa21.56■■□□□ 1.04
CMTM3-210ENST00000565666 SEPT14Q6ZU15 432 aa21.56■■□□□ 1.04
CMTM3-210ENST00000565666 GPKOWQ92917 476 aaPredicted RBP eCLIP21.56■■□□□ 1.04
CMTM3-210ENST00000565666 VTI1AQ96AJ9 217 aa21.56■■□□□ 1.04
CMTM3-210ENST00000565666 PDCD2LQ9BRP1 358 aa21.56■■□□□ 1.04
CMTM3-210ENST00000565666 STARD7Q9NQZ5 370 aa21.56■■□□□ 1.04
CMTM3-210ENST00000565666 FAM217BQ9NTX9 383 aaPredicted RBP21.56■■□□□ 1.04
CMTM3-210ENST00000565666 ZMYND8Q9ULU4 1186 aaPredicted RBP21.56■■□□□ 1.04
CMTM3-210ENST00000565666 KIAA1217Q5T5P2 1943 aa21.55■■□□□ 1.04
CMTM3-210ENST00000565666 NKRFO15226 690 aaKnown RBP eCLIP21.55■■□□□ 1.042e-6■■■□□ 16.7
CMTM3-210ENST00000565666 ZEB2O60315 1214 aa21.55■■□□□ 1.04
CMTM3-210ENST00000565666 TXNP10599 105 aaKnown RBP21.55■■□□□ 1.04
CMTM3-210ENST00000565666 ADD1P35611 737 aaKnown RBP21.55■■□□□ 1.04
CMTM3-210ENST00000565666 PGM5Q15124 567 aa21.55■■□□□ 1.04
CMTM3-210ENST00000565666 FSCN1Q16658 493 aaKnown RBP21.55■■□□□ 1.04
CMTM3-210ENST00000565666 CCSAPQ6IQ19 270 aaPredicted RBP21.55■■□□□ 1.04
CMTM3-210ENST00000565666 GLT1D1Q96MS3 346 aa21.55■■□□□ 1.04
CMTM3-210ENST00000565666 PDRG1Q9NUG6 133 aa21.55■■□□□ 1.04
CMTM3-210ENST00000565666 V9GY48 417 aaPredicted RBP21.55■■□□□ 1.04
CMTM3-210ENST00000565666 NID2Q14112 1375 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 CTAGE5O15320 804 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 EIF3JO75822 258 aaKnown RBP21.54■■□□□ 1.04
CMTM3-210ENST00000565666 SYN1P17600 705 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 ANAPC15P60006 121 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 NKX3-2P78367 333 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 FUT2Q10981 343 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 TOB2Q14106 344 aaPredicted RBP21.54■■□□□ 1.04
CMTM3-210ENST00000565666 USP17L6PQ6QN14 398 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 OR6J1Q8NGC5 347 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 PSTPIP2Q9H939 334 aa21.54■■□□□ 1.04
CMTM3-210ENST00000565666 CCND2P30279 289 aa21.53■■□□□ 1.04
CMTM3-210ENST00000565666 NAPAP54920 295 aa21.53■■□□□ 1.04
CMTM3-210ENST00000565666 TRIM60Q495X7 471 aa21.53■■□□□ 1.04
CMTM3-210ENST00000565666 WWC2Q6AWC2 1192 aa21.53■■□□□ 1.04
CMTM3-210ENST00000565666 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 PIK3CDO00329 1044 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 MEIS2O14770 477 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 ARIH2O95376 493 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 PDIA3P30101 505 aaKnown RBP21.52■■□□□ 1.04
CMTM3-210ENST00000565666 EVCP57679 992 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 CCT2P78371 535 aaKnown RBP21.52■■□□□ 1.04
CMTM3-210ENST00000565666 SNX17Q15036 470 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 BRDTQ58F21 947 aaPredicted RBP21.52■■□□□ 1.04
CMTM3-210ENST00000565666 ZNF713Q8N859 430 aaPredicted RBP21.52■■□□□ 1.04
CMTM3-210ENST00000565666 IL31RAQ8NI17 732 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 COPS5Q92905 334 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 LARP6Q9BRS8 491 aaKnown RBP21.52■■□□□ 1.04
CMTM3-210ENST00000565666 PRKAG2Q9UGJ0 569 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 MRVI1Q9Y6F6 885 aa21.52■■□□□ 1.04
CMTM3-210ENST00000565666 SEC24BO95487 1268 aa21.51■■□□□ 1.03
CMTM3-210ENST00000565666 CPT1AP50416 773 aa21.51■■□□□ 1.03
CMTM3-210ENST00000565666 AKAP17AQ02040 695 aaKnown RBP21.51■■□□□ 1.03
CMTM3-210ENST00000565666 UBE2SQ16763 222 aa21.51■■□□□ 1.03
CMTM3-210ENST00000565666 C1orf53Q5VUE5 145 aa21.51■■□□□ 1.03
CMTM3-210ENST00000565666 PPP1R18Q6NYC8 613 aa21.51■■□□□ 1.03
CMTM3-210ENST00000565666 CXCL17Q6UXB2 119 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms