RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 SCFD2Q8WU76 684 aa22.09■■□□□ 1.13
SPSB3-207ENST00000565550 TBC1D5Q92609 795 aa22.09■■□□□ 1.13
SPSB3-207ENST00000565550 COPS5Q92905 334 aa22.09■■□□□ 1.13
SPSB3-207ENST00000565550 WNT8AQ9H1J5 351 aa22.09■■□□□ 1.13
SPSB3-207ENST00000565550 GPHNQ9NQX3 736 aaPredicted RBP22.09■■□□□ 1.13
SPSB3-207ENST00000565550 TRMT13Q9NUP7 481 aaKnown RBP22.09■■□□□ 1.13
SPSB3-207ENST00000565550 CXXC1Q9P0U4 656 aaPredicted RBP22.09■■□□□ 1.13
SPSB3-207ENST00000565550 NKRFO15226 690 aaKnown RBP eCLIP22.08■■□□□ 1.13
SPSB3-207ENST00000565550 OTOP2Q7RTS6 562 aa22.08■■□□□ 1.13
SPSB3-207ENST00000565550 ENAHQ8N8S7 591 aaPredicted RBP22.08■■□□□ 1.13
SPSB3-207ENST00000565550 MTG1Q9BT17 334 aaPredicted RBP22.08■■□□□ 1.13
SPSB3-207ENST00000565550 LSG1Q9H089 658 aaKnown RBP22.08■■□□□ 1.13
SPSB3-207ENST00000565550 CTNNA3Q9UI47 895 aa22.08■■□□□ 1.13
SPSB3-207ENST00000565550 B4DLN1 442 aa22.07■■□□□ 1.12
SPSB3-207ENST00000565550 CDC45O75419 566 aa22.07■■□□□ 1.12
SPSB3-207ENST00000565550 TXNP10599 105 aaKnown RBP22.07■■□□□ 1.12
SPSB3-207ENST00000565550 CYP2C9P11712 490 aa22.07■■□□□ 1.12
SPSB3-207ENST00000565550 MRPL12P52815 198 aaKnown RBP22.07■■□□□ 1.12
SPSB3-207ENST00000565550 BRDTQ58F21 947 aaPredicted RBP22.07■■□□□ 1.12
SPSB3-207ENST00000565550 SCLYQ96I15 445 aa22.07■■□□□ 1.12
SPSB3-207ENST00000565550 KRT23Q9C075 422 aa22.07■■□□□ 1.12
SPSB3-207ENST00000565550 MTIF3Q9H2K0 278 aaKnown RBP22.07■■□□□ 1.12
SPSB3-207ENST00000565550 VAT1LQ9HCJ6 419 aa22.07■■□□□ 1.12
SPSB3-207ENST00000565550 EYSQ5T1H1 3165 aa22.07■■□□□ 1.12
SPSB3-207ENST00000565550 TNKSO95271 1327 aa22.06■■□□□ 1.12
SPSB3-207ENST00000565550 ABCB11O95342 1321 aa22.06■■□□□ 1.12
SPSB3-207ENST00000565550 SUPT20HL2P0C7V6 817 aa22.06■■□□□ 1.12
SPSB3-207ENST00000565550 NBPF20Q3BBV1 942 aa22.06■■□□□ 1.12
SPSB3-207ENST00000565550 ASPRV1Q53RT3 343 aa22.06■■□□□ 1.12
SPSB3-207ENST00000565550 RPUSD2Q8IZ73 545 aaKnown RBP22.06■■□□□ 1.12
SPSB3-207ENST00000565550 SYTL5Q8TDW5 730 aaPredicted RBP22.06■■□□□ 1.12
SPSB3-207ENST00000565550 PPP1R13LQ8WUF5 828 aa22.06■■□□□ 1.12
SPSB3-207ENST00000565550 TAAR1Q96RJ0 339 aa22.06■■□□□ 1.12
SPSB3-207ENST00000565550 RBM8AQ9Y5S9 174 aaKnown RBP22.06■■□□□ 1.12
SPSB3-207ENST00000565550 A6NJR5 290 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 DHX16O60231 1041 aaKnown RBP22.05■■□□□ 1.12
SPSB3-207ENST00000565550 ARIH2O95376 493 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 CYP21A2P08686 494 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 PARP1P09874 1014 aaKnown RBP22.05■■□□□ 1.12
SPSB3-207ENST00000565550 TTLL4Q14679 1199 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 QRICH1Q2TAL8 776 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 FAM47CQ5HY64 1035 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 MAP4K1Q92918 833 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 VWCEQ96DN2 955 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 MAF1Q9H063 256 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 JMJD4Q9H9V9 463 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 COL20A1Q9P218 1284 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 MSRAQ9UJ68 235 aa22.05■■□□□ 1.12
SPSB3-207ENST00000565550 CUL9Q8IWT3 2517 aa22.04■■□□□ 1.12
SPSB3-207ENST00000565550 KPNA6O60684 536 aa22.04■■□□□ 1.12
SPSB3-207ENST00000565550 RAB30Q15771 203 aa22.04■■□□□ 1.12
SPSB3-207ENST00000565550 FBXO11Q86XK2 927 aa22.04■■□□□ 1.12
SPSB3-207ENST00000565550 MCF2L2Q86YR7 1114 aa22.04■■□□□ 1.12
SPSB3-207ENST00000565550 UBAC1Q9BSL1 405 aa22.04■■□□□ 1.12
SPSB3-207ENST00000565550 CNNM2Q9H8M5 875 aa22.04■■□□□ 1.12
SPSB3-207ENST00000565550 ANO2Q9NQ90 1003 aa22.04■■□□□ 1.12
SPSB3-207ENST00000565550 CCDC62Q6P9F0 684 aa22.03■■□□□ 1.12
SPSB3-207ENST00000565550 SEPT14Q6ZU15 432 aa22.03■■□□□ 1.12
SPSB3-207ENST00000565550 STOX1Q6ZVD7 989 aa22.03■■□□□ 1.12
SPSB3-207ENST00000565550 NSUN6Q8TEA1 469 aaKnown RBP22.03■■□□□ 1.12
SPSB3-207ENST00000565550 PRDM12Q9H4Q4 367 aa22.03■■□□□ 1.12
SPSB3-207ENST00000565550 MRPL11Q9Y3B7 192 aaKnown RBP22.03■■□□□ 1.12
SPSB3-207ENST00000565550 U3KPZ7 1027 aaPredicted RBP22.03■■□□□ 1.12
SPSB3-207ENST00000565550 IFIT1BQ5T764 474 aaKnown RBP22.02■■□□□ 1.12
SPSB3-207ENST00000565550 NFRKBQ6P4R8 1299 aa22.02■■□□□ 1.12
SPSB3-207ENST00000565550 STAG2Q8N3U4 1231 aa22.02■■□□□ 1.12
SPSB3-207ENST00000565550 USP38Q8NB14 1042 aa22.02■■□□□ 1.12
SPSB3-207ENST00000565550 RMDN3Q96TC7 470 aa22.02■■□□□ 1.12
SPSB3-207ENST00000565550 GAS2L1Q99501 681 aaPredicted RBP22.02■■□□□ 1.12
SPSB3-207ENST00000565550 NKX2-4Q9H2Z4 354 aa22.02■■□□□ 1.12
SPSB3-207ENST00000565550 YBX2Q9Y2T7 364 aaKnown RBP22.02■■□□□ 1.12
SPSB3-207ENST00000565550 SLC4A7Q9Y6M7 1214 aa22.02■■□□□ 1.12
SPSB3-207ENST00000565550 COL9A3Q14050 684 aaPredicted RBP22.01■■□□□ 1.11
SPSB3-207ENST00000565550 STXBP2Q15833 593 aa22.01■■□□□ 1.11
SPSB3-207ENST00000565550 LY6KQ17RY6 165 aa22.01■■□□□ 1.11
SPSB3-207ENST00000565550 CYB5R4Q7L1T6 521 aa22.01■■□□□ 1.11
SPSB3-207ENST00000565550 AFG1LQ8WV93 481 aa22.01■■□□□ 1.11
SPSB3-207ENST00000565550 IWS1Q96ST2 819 aa22.01■■□□□ 1.11
SPSB3-207ENST00000565550 PRUNE2Q8WUY3 3088 aa22.01■■□□□ 1.11
SPSB3-207ENST00000565550 ZBBXA8MT70 800 aa22■■□□□ 1.11
SPSB3-207ENST00000565550 RABGGTBP53611 331 aa22■■□□□ 1.11
SPSB3-207ENST00000565550 CHMP4BP1P59074 171 aa22■■□□□ 1.11
SPSB3-207ENST00000565550 PTPN11Q06124 597 aaPredicted RBP22■■□□□ 1.11
SPSB3-207ENST00000565550 SEC23AQ15436 765 aa22■■□□□ 1.11
SPSB3-207ENST00000565550 ARHGEF16Q5VV41 709 aa22■■□□□ 1.11
SPSB3-207ENST00000565550 DEFB128Q7Z7B8 93 aa22■■□□□ 1.11
SPSB3-207ENST00000565550 SLC28A3Q9HAS3 691 aa22■■□□□ 1.11
SPSB3-207ENST00000565550 KLRF2D3W0D1 207 aa21.99■■□□□ 1.11
SPSB3-207ENST00000565550 CFBP00751 764 aa21.99■■□□□ 1.11
SPSB3-207ENST00000565550 GH1P01241 217 aa21.99■■□□□ 1.11
SPSB3-207ENST00000565550 PFKMP08237 780 aa21.99■■□□□ 1.11
SPSB3-207ENST00000565550 CHST3Q7LGC8 479 aa21.99■■□□□ 1.11
SPSB3-207ENST00000565550 PPM1EQ8WY54 764 aa21.99■■□□□ 1.11
SPSB3-207ENST00000565550 AMNQ9BXJ7 453 aa21.99■■□□□ 1.11
SPSB3-207ENST00000565550 E7EWF7 191 aa21.98■■□□□ 1.11
SPSB3-207ENST00000565550 MMP3P08254 477 aa21.98■■□□□ 1.11
SPSB3-207ENST00000565550 EIF2AK2P19525 551 aaKnown RBP21.98■■□□□ 1.11
SPSB3-207ENST00000565550 ARHGAP1Q07960 439 aa21.98■■□□□ 1.11
SPSB3-207ENST00000565550 CASC1Q6TDU7 716 aa21.98■■□□□ 1.11
SPSB3-207ENST00000565550 RETREG2Q8NC44 543 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms