RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 IQCF3P0C7M6 154 aa25.13■■□□□ 1.61
RPUSD1-206ENST00000565503 BFSP2Q13515 415 aa25.13■■□□□ 1.61
RPUSD1-206ENST00000565503 VPS53Q5VIR6 699 aa25.13■■□□□ 1.61
RPUSD1-206ENST00000565503 COG5Q9UP83 839 aa25.13■■□□□ 1.61
RPUSD1-206ENST00000565503 FRMPD2Q68DX3 1309 aaPredicted RBP25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 WDR19Q8NEZ3 1342 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 B4DLN1 442 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 KIF28PB7ZC32 967 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 RFXAPO00287 272 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 PLA2G5P39877 138 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 KCNQ1P51787 676 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 MRPL12P52815 198 aaKnown RBP25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 RPS6P62753 249 aaKnown RBP25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 FTOQ9C0B1 505 aaKnown RBP eCLIP25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 GPCPD1Q9NPB8 672 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 TOMM22Q9NS69 142 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 KIAA1217Q5T5P2 1943 aa25.12■■□□□ 1.61
RPUSD1-206ENST00000565503 BAIAP3O94812 1187 aa25.11■■□□□ 1.61
RPUSD1-206ENST00000565503 PDHBP11177 359 aa25.11■■□□□ 1.61
RPUSD1-206ENST00000565503 TAP1Q03518 808 aa25.11■■□□□ 1.61
RPUSD1-206ENST00000565503 HERC6Q8IVU3 1022 aa25.11■■□□□ 1.61
RPUSD1-206ENST00000565503 HELLSQ9NRZ9 838 aa25.11■■□□□ 1.61
RPUSD1-206ENST00000565503 EPOPA6NHQ4 379 aa25.1■■□□□ 1.61
RPUSD1-206ENST00000565503 EVI5LQ96CN4 794 aa25.1■■□□□ 1.61
RPUSD1-206ENST00000565503 CERS4Q9HA82 394 aa25.1■■□□□ 1.61
RPUSD1-206ENST00000565503 NOD1Q9Y239 953 aa25.1■■□□□ 1.61
RPUSD1-206ENST00000565503 COL4A4P53420 1690 aaPredicted RBP25.1■■□□□ 1.61
RPUSD1-206ENST00000565503 SALL3Q9BXA9 1300 aa25.1■■□□□ 1.61
RPUSD1-206ENST00000565503 TXNP10599 105 aaKnown RBP25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 ZNF543Q08ER8 600 aa25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 RRP12Q5JTH9 1297 aaKnown RBP25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 CCDC155Q8N6L0 562 aa25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 RGS22Q8NE09 1264 aa25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 ARNTL2Q8WYA1 636 aa25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 COPS5Q92905 334 aa25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 TTC14Q96N46 770 aa25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 MYH6P13533 1939 aa25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 ZMYM6O95789 1325 aa25.09■■□□□ 1.61
RPUSD1-206ENST00000565503 FGAP02671 866 aa25.08■■□□□ 1.61
RPUSD1-206ENST00000565503 CAGE1Q8TC20 777 aa25.08■■□□□ 1.61
RPUSD1-206ENST00000565503 FAM122AQ96E09 287 aa25.08■■□□□ 1.61
RPUSD1-206ENST00000565503 MAF1Q9H063 256 aa25.08■■□□□ 1.61
RPUSD1-206ENST00000565503 PCDHB15Q9Y5E8 787 aa25.08■■□□□ 1.61
RPUSD1-206ENST00000565503 SNHG28P0DPA3 235 aa25.07■■□□□ 1.6
RPUSD1-206ENST00000565503 TICAM2Q86XR7 235 aa25.07■■□□□ 1.6
RPUSD1-206ENST00000565503 AFAP1L1Q8TED9 768 aa25.07■■□□□ 1.6
RPUSD1-206ENST00000565503 ARHGEF15O94989 841 aa25.06■■□□□ 1.6
RPUSD1-206ENST00000565503 PCP11498 1178 aaKnown RBP25.06■■□□□ 1.6
RPUSD1-206ENST00000565503 KCNJ6P48051 423 aa25.06■■□□□ 1.6
RPUSD1-206ENST00000565503 PTGISQ16647 500 aa25.06■■□□□ 1.6
RPUSD1-206ENST00000565503 SESTD1Q86VW0 696 aa25.06■■□□□ 1.6
RPUSD1-206ENST00000565503 PPP1R13LQ8WUF5 828 aa25.06■■□□□ 1.6
RPUSD1-206ENST00000565503 TLL1O43897 1013 aa25.05■■□□□ 1.6
RPUSD1-206ENST00000565503 ARIH2O95376 493 aa25.05■■□□□ 1.6
RPUSD1-206ENST00000565503 PARNO95453 639 aaKnown RBP25.05■■□□□ 1.6
RPUSD1-206ENST00000565503 GRB10Q13322 594 aa25.05■■□□□ 1.6
RPUSD1-206ENST00000565503 KRT40Q6A162 431 aa25.05■■□□□ 1.6
RPUSD1-206ENST00000565503 CCDC62Q6P9F0 684 aa25.05■■□□□ 1.6
RPUSD1-206ENST00000565503 HLA-CQ95604 372 aa25.05■■□□□ 1.6
RPUSD1-206ENST00000565503 MCMDC2Q4G0Z9 681 aa25.04■■□□□ 1.6
RPUSD1-206ENST00000565503 GPATCH4Q5T3I0 446 aaKnown RBP25.04■■□□□ 1.6
RPUSD1-206ENST00000565503 LMCD1Q9NZU5 365 aa25.04■■□□□ 1.6
RPUSD1-206ENST00000565503 ZBTB47Q9UFB7 747 aaPredicted RBP25.04■■□□□ 1.6
RPUSD1-206ENST00000565503 MYH7BA7E2Y1 1941 aa25.04■■□□□ 1.6
RPUSD1-206ENST00000565503 HSPD1P10809 573 aaKnown RBP25.03■■□□□ 1.6
RPUSD1-206ENST00000565503 WDR5P61964 334 aaKnown RBP25.03■■□□□ 1.6
RPUSD1-206ENST00000565503 RBL2Q08999 1139 aa25.03■■□□□ 1.6
RPUSD1-206ENST00000565503 AFG1LQ8WV93 481 aa25.03■■□□□ 1.6
RPUSD1-206ENST00000565503 CTAGE1Q96RT6 745 aa25.03■■□□□ 1.6
RPUSD1-206ENST00000565503 ARIH1Q9Y4X5 557 aaPredicted RBP25.03■■□□□ 1.6
RPUSD1-206ENST00000565503 SIP14410 1827 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 A0A0D9SFI3 127 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 LPXNO60711 386 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 GH1P01241 217 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 MMP3P08254 477 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 SELPP16109 830 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 CHMP4BP1P59074 171 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 USH1GQ495M9 461 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 GDF6Q6KF10 455 aaPredicted RBP25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 MFSD6Q6ZSS7 791 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 FAM227BQ96M60 508 aa25.02■■□□□ 1.6
RPUSD1-206ENST00000565503 CNKSR3Q6P9H4 555 aa25.01■■□□□ 1.59
RPUSD1-206ENST00000565503 LRRC8DQ7L1W4 858 aa25.01■■□□□ 1.59
RPUSD1-206ENST00000565503 LAMA4Q16363 1823 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 CXCL10P02778 98 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 CASTP20810 708 aaKnown RBP25■■□□□ 1.59
RPUSD1-206ENST00000565503 HAND2P61296 217 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 ARHGAP1Q07960 439 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 GPNMBQ14956 572 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 NSUN6Q8TEA1 469 aaKnown RBP25■■□□□ 1.59
RPUSD1-206ENST00000565503 KAT2BQ92831 832 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 IWS1Q96ST2 819 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 ZBED2Q9BTP6 218 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 RNF41Q9H4P4 317 aaPredicted RBP25■■□□□ 1.59
RPUSD1-206ENST00000565503 ABCB11O95342 1321 aa25■■□□□ 1.59
RPUSD1-206ENST00000565503 NT5C2P49902 561 aa24.99■■□□□ 1.59
RPUSD1-206ENST00000565503 PDE1AP54750 535 aa24.99■■□□□ 1.59
RPUSD1-206ENST00000565503 LY6KQ17RY6 165 aa24.99■■□□□ 1.59
RPUSD1-206ENST00000565503 SEPT14Q6ZU15 432 aa24.99■■□□□ 1.59
RPUSD1-206ENST00000565503 DHX38Q92620 1227 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms