RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 TPM3P06753 285 aa28.39■■■□□ 2.13
LINC01003-201ENST00000564834 VCAM1P19320 739 aa28.39■■■□□ 2.13
LINC01003-201ENST00000564834 MSNP26038 577 aaKnown RBP28.39■■■□□ 2.13
LINC01003-201ENST00000564834 SUPT20HL1Q3ZLR7 823 aa28.39■■■□□ 2.13
LINC01003-201ENST00000564834 SAMD1Q6SPF0 538 aaPredicted RBP28.39■■■□□ 2.13
LINC01003-201ENST00000564834 ENOX1Q8TC92 643 aaKnown RBP28.39■■■□□ 2.13
LINC01003-201ENST00000564834 LRRC15Q8TF66 581 aa28.39■■■□□ 2.13
LINC01003-201ENST00000564834 ZKSCAN4Q969J2 545 aaPredicted RBP28.39■■■□□ 2.13
LINC01003-201ENST00000564834 KLRG1Q96E93 195 aa28.39■■■□□ 2.13
LINC01003-201ENST00000564834 PLIN2Q99541 437 aa28.39■■■□□ 2.13
LINC01003-201ENST00000564834 RRAGDQ9NQL2 400 aaPredicted RBP28.39■■■□□ 2.13
LINC01003-201ENST00000564834 GCOM1H8Y6P7 765 aaPredicted RBP28.38■■■□□ 2.13
LINC01003-201ENST00000564834 CFBP00751 764 aa28.38■■■□□ 2.13
LINC01003-201ENST00000564834 POLR2MP0CAP2 368 aa28.38■■■□□ 2.13
LINC01003-201ENST00000564834 PTPRAP18433 802 aa28.38■■■□□ 2.13
LINC01003-201ENST00000564834 CIITAP33076 1130 aa28.38■■■□□ 2.13
LINC01003-201ENST00000564834 Q4G0T1 1027 aa28.38■■■□□ 2.13
LINC01003-201ENST00000564834 EMILIN3Q9NT22 766 aa28.38■■■□□ 2.13
LINC01003-201ENST00000564834 PCDHA12Q9UN75 941 aa28.38■■■□□ 2.13
LINC01003-201ENST00000564834 RPN1P04843 607 aaKnown RBP28.37■■■□□ 2.13
LINC01003-201ENST00000564834 CYP3A4P08684 503 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 BACE1P56817 501 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 SPP2Q13103 211 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 SEMA3FQ13275 785 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 DRC7Q8IY82 874 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 SLFN12Q8IYM2 578 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 ZNF280CQ8ND82 737 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.37■■■□□ 2.13
LINC01003-201ENST00000564834 STK17AQ9UEE5 414 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 ZNF536O15090 1300 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 TBX3O15119 743 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 FMR1Q06787 632 aaKnown RBP eCLIP28.37■■■□□ 2.13
LINC01003-201ENST00000564834 KRT79Q5XKE5 535 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 TANGO6Q9C0B7 1094 aa28.37■■■□□ 2.13
LINC01003-201ENST00000564834 GRB10Q13322 594 aa28.36■■■□□ 2.13
LINC01003-201ENST00000564834 C9orf131Q5VYM1 1079 aa28.36■■■□□ 2.13
LINC01003-201ENST00000564834 CCPG1Q9ULG6 757 aa28.36■■■□□ 2.13
LINC01003-201ENST00000564834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.36■■■□□ 2.13
LINC01003-201ENST00000564834 DGKZQ13574 1117 aa28.35■■■□□ 2.13
LINC01003-201ENST00000564834 NOL9Q5SY16 702 aaKnown RBP28.35■■■□□ 2.13
LINC01003-201ENST00000564834 SNX29Q8TEQ0 813 aa28.35■■■□□ 2.13
LINC01003-201ENST00000564834 CDK5RAP3Q96JB5 506 aa28.35■■■□□ 2.13
LINC01003-201ENST00000564834 PPP1R9AQ9ULJ8 1098 aa28.35■■■□□ 2.13
LINC01003-201ENST00000564834 RBBP6Q7Z6E9 1792 aaKnown RBP28.35■■■□□ 2.13
LINC01003-201ENST00000564834 KCNB1Q14721 858 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 PRR16Q569H4 304 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 ZNF658Q5TYW1 1059 aaPredicted RBP28.34■■■□□ 2.13
LINC01003-201ENST00000564834 FCHSD1Q86WN1 690 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 ETNPPLQ8TBG4 499 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 LENG9Q96B70 501 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 EHMT1Q9H9B1 1298 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 SLC38A10Q9HBR0 1119 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 FANCLQ9NW38 375 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 FZD1Q9UP38 647 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 FLOT1O75955 427 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 AMPD3Q01432 767 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 TBC1D5Q92609 795 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 PNMA5Q96PV4 448 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 RPAP3Q9H6T3 665 aaPredicted RBP28.34■■■□□ 2.13
LINC01003-201ENST00000564834 NFE2L3Q9Y4A8 694 aa28.34■■■□□ 2.13
LINC01003-201ENST00000564834 PPP1R3GB7ZBB8 358 aa28.33■■■□□ 2.13
LINC01003-201ENST00000564834 FAM86B1E9PN63 330 aa28.33■■■□□ 2.13
LINC01003-201ENST00000564834 SLC26A4O43511 780 aa28.33■■■□□ 2.13
LINC01003-201ENST00000564834 FAM86B2P0C5J1 330 aa28.33■■■□□ 2.13
LINC01003-201ENST00000564834 CD44P16070 742 aaKnown RBP28.33■■■□□ 2.13
LINC01003-201ENST00000564834 FANCCQ00597 558 aa28.33■■■□□ 2.13
LINC01003-201ENST00000564834 C12orf42Q96LP6 360 aa28.33■■■□□ 2.13
LINC01003-201ENST00000564834 AGBL1Q96MI9 1066 aa28.33■■■□□ 2.13
LINC01003-201ENST00000564834 C19orf81C9J6K1 198 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 FDX1P10109 184 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 ATP1A3P13637 1013 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 TMEM119Q4V9L6 283 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 GJA10Q969M2 543 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 FAM20AQ96MK3 541 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 MED15Q96RN5 788 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 C7orf25Q9BPX7 421 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 TRIM9Q9C026 710 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 IFNKQ9P0W0 207 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 PNMA2Q9UL42 364 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 ZHX2Q9Y6X8 837 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 RLFQ13129 1914 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 KDM3AQ9Y4C1 1321 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 KLRC4O43908 158 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 TRMT44Q8IYL2 757 aaKnown RBP28.32■■■□□ 2.12
LINC01003-201ENST00000564834 SMYD4Q8IYR2 804 aaPredicted RBP28.32■■■□□ 2.12
LINC01003-201ENST00000564834 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.32■■■□□ 2.12
LINC01003-201ENST00000564834 DCPSQ96C86 337 aaKnown RBP28.32■■■□□ 2.12
LINC01003-201ENST00000564834 XPO4Q9C0E2 1151 aaKnown RBP28.32■■■□□ 2.12
LINC01003-201ENST00000564834 BLOC1S4Q9NUP1 217 aa28.32■■■□□ 2.12
LINC01003-201ENST00000564834 SYNRGQ9UMZ2 1314 aa28.31■■■□□ 2.12
LINC01003-201ENST00000564834 HYIQ5T013 277 aa28.31■■■□□ 2.12
LINC01003-201ENST00000564834 LARP4BQ92615 738 aaKnown RBP28.31■■■□□ 2.12
LINC01003-201ENST00000564834 NUDT12Q9BQG2 462 aa28.31■■■□□ 2.12
LINC01003-201ENST00000564834 RHOBTB3O94955 611 aa28.3■■■□□ 2.12
LINC01003-201ENST00000564834 ZNF18P17022 549 aa28.3■■■□□ 2.12
LINC01003-201ENST00000564834 ZNF76P36508 570 aa28.3■■■□□ 2.12
LINC01003-201ENST00000564834 HSD17B4P51659 736 aa28.3■■■□□ 2.12
LINC01003-201ENST00000564834 KLHL10Q6JEL2 608 aa28.3■■■□□ 2.12
LINC01003-201ENST00000564834 SV2BQ7L1I2 683 aa28.3■■■□□ 2.12
LINC01003-201ENST00000564834 NT5C3AQ9H0P0 336 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms