RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 KCNA10Q16322 511 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 RTN1Q16799 776 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 APOA5Q6Q788 366 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 SLC39A5Q6ZMH5 540 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 Q6ZUG5 572 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 TLK2Q86UE8 772 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 GLT1D1Q96MS3 346 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 WDR11Q9BZH6 1224 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 STARD7Q9NQZ5 370 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 PDGFCQ9NRA1 345 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 ZMYND8Q9ULU4 1186 aaPredicted RBP15.79■□□□□ 0.12
CNOT1-206ENST00000564557 PHF24Q9UPV7 400 aa15.79■□□□□ 0.12
CNOT1-206ENST00000564557 TNRC18O15417 2968 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-206ENST00000564557 CCDC196A0A1B0GTZ2 297 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 GOLGA8AA7E2F4 631 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 GOLGA8BA8MQT2 603 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 PPP1R11O60927 126 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-206ENST00000564557 SMPD1P17405 629 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 EIF2AK2P19525 551 aaKnown RBP15.78■□□□□ 0.12
CNOT1-206ENST00000564557 ACLYP53396 1101 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 RTP1P59025 263 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 COL9A3Q14050 684 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-206ENST00000564557 TTLL4Q14679 1199 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 PPP2R5BQ15173 497 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 BRDTQ58F21 947 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-206ENST00000564557 TAPT1Q6NXT6 567 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 CMTR1Q8N1G2 835 aaKnown RBP15.78■□□□□ 0.12
CNOT1-206ENST00000564557 SRBD1Q8N5C6 995 aaKnown RBP15.78■□□□□ 0.12
CNOT1-206ENST00000564557 KLHDC9Q8NEP7 349 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 SCFD2Q8WU76 684 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 USP26Q9BXU7 913 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 Q9Y3F1 56 aa15.78■□□□□ 0.12
CNOT1-206ENST00000564557 MKI67P46013 3256 aaKnown RBP15.78■□□□□ 0.12
CNOT1-206ENST00000564557 A0A1W2PQ45 241 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-206ENST00000564557 A0A1W2PQY0 241 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 NKRFO15226 690 aaKnown RBP eCLIP15.77■□□□□ 0.12
CNOT1-206ENST00000564557 ASGR1P07306 291 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 MYCLP12524 364 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-206ENST00000564557 CPA1P15085 419 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 SYN1P17600 705 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 RPS6KB1P23443 525 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 CST5P28325 142 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-206ENST00000564557 HOXA13P31271 388 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-206ENST00000564557 HSD17B4P51659 736 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 SLC35G1Q2M3R5 365 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 DUSP28Q4G0W2 176 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 SEPT14Q6ZU15 432 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 TMTC3Q6ZXV5 915 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 FCHSD1Q86WN1 690 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 SMARCC2Q8TAQ2 1214 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 BRF1Q92994 677 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 UPF3AQ9H1J1 476 aaKnown RBP15.77■□□□□ 0.12
CNOT1-206ENST00000564557 CYP46A1Q9Y6A2 500 aa15.77■□□□□ 0.12
CNOT1-206ENST00000564557 ADCY6O43306 1168 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 NR3C2P08235 984 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 TXNP10599 105 aaKnown RBP15.76■□□□□ 0.11
CNOT1-206ENST00000564557 EDNRBP24530 442 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 METAP2P50579 478 aaKnown RBP eCLIP15.76■□□□□ 0.11
CNOT1-206ENST00000564557 RCAN1P53805 252 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 BEX3Q00994 111 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 APOBRQ0VD83 1088 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 FSCN1Q16658 493 aaKnown RBP15.76■□□□□ 0.11
CNOT1-206ENST00000564557 OR6J1Q8NGC5 347 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 BRPF3Q9ULD4 1205 aa15.76■□□□□ 0.11
CNOT1-206ENST00000564557 GNEQ9Y223 722 aaKnown RBP15.76■□□□□ 0.11
CNOT1-206ENST00000564557 LCTP09848 1927 aa15.75■□□□□ 0.11
CNOT1-206ENST00000564557 MYADML2A6NDP7 307 aa15.75■□□□□ 0.11
CNOT1-206ENST00000564557 EIF3JO75822 258 aaKnown RBP15.75■□□□□ 0.11
CNOT1-206ENST00000564557 CABYRO75952 493 aa15.75■□□□□ 0.11
CNOT1-206ENST00000564557 CPT1AP50416 773 aa15.75■□□□□ 0.11
CNOT1-206ENST00000564557 TRIM60Q495X7 471 aa15.75■□□□□ 0.11
CNOT1-206ENST00000564557 RUFY3Q7L099 469 aa15.75■□□□□ 0.11
CNOT1-206ENST00000564557 HEATR3Q7Z4Q2 680 aa15.75■□□□□ 0.11
CNOT1-206ENST00000564557 LBHD1Q9BQE6 289 aaPredicted RBP15.75■□□□□ 0.11
CNOT1-206ENST00000564557 PRDM5Q9NQX1 630 aaPredicted RBP15.75■□□□□ 0.11
CNOT1-206ENST00000564557 ELP1O95163 1332 aa15.74■□□□□ 0.11
CNOT1-206ENST00000564557 hCG_1642624A0A1W2PR95 340 aa15.74■□□□□ 0.11
CNOT1-206ENST00000564557 RBM47A0AV96 593 aaKnown RBP15.74■□□□□ 0.11
CNOT1-206ENST00000564557 DCDC2CA8MYV0 355 aa15.74■□□□□ 0.11
CNOT1-206ENST00000564557 OPLAHO14841 1288 aa15.74■□□□□ 0.11
CNOT1-206ENST00000564557 CCND2P30279 289 aa15.74■□□□□ 0.11
CNOT1-206ENST00000564557 AKAP17AQ02040 695 aaKnown RBP15.74■□□□□ 0.11
CNOT1-206ENST00000564557 GHRHRQ02643 423 aa15.74■□□□□ 0.11
CNOT1-206ENST00000564557 C1orf53Q5VUE5 145 aa15.74■□□□□ 0.11
CNOT1-206ENST00000564557 PSTPIP2Q9H939 334 aa15.74■□□□□ 0.11
CNOT1-206ENST00000564557 COLQQ9Y215 455 aaPredicted RBP15.74■□□□□ 0.11
CNOT1-206ENST00000564557 MROH7Q68CQ1 1323 aa15.73■□□□□ 0.11
CNOT1-206ENST00000564557 ALPK3Q96L96 1907 aa15.73■□□□□ 0.11
CNOT1-206ENST00000564557 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-206ENST00000564557 PQBP1O60828 265 aaKnown RBP15.73■□□□□ 0.11
CNOT1-206ENST00000564557 IRX5P78411 483 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-206ENST00000564557 TLE2Q04725 743 aa15.73■□□□□ 0.11
CNOT1-206ENST00000564557 CCSAPQ6IQ19 270 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-206ENST00000564557 KCNV1Q6PIU1 500 aa15.73■□□□□ 0.11
CNOT1-206ENST00000564557 IFNLR1Q8IU57 520 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-206ENST00000564557 SP7Q8TDD2 431 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-206ENST00000564557 PDCD2LQ9BRP1 358 aa15.73■□□□□ 0.11
CNOT1-206ENST00000564557 TM6SF1Q9BZW5 370 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms