RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 PARP1P09874 1014 aaKnown RBP27.9■■■□□ 2.06
NME3-206ENST00000564252 GSPT1P15170 499 aaKnown RBP27.9■■■□□ 2.06
NME3-206ENST00000564252 MRPL12P52815 198 aaKnown RBP27.9■■■□□ 2.06
NME3-206ENST00000564252 QRICH1Q2TAL8 776 aa27.9■■■□□ 2.06
NME3-206ENST00000564252 TRMT13Q9NUP7 481 aaKnown RBP27.9■■■□□ 2.06
NME3-206ENST00000564252 CXXC1Q9P0U4 656 aaPredicted RBP27.9■■■□□ 2.06
NME3-206ENST00000564252 SPTBN5Q9NRC6 3674 aaKnown RBP27.9■■■□□ 2.06
NME3-206ENST00000564252 MYH6P13533 1939 aa27.89■■■□□ 2.06
NME3-206ENST00000564252 A6NJR5 290 aa27.89■■■□□ 2.06
NME3-206ENST00000564252 ARIH2O95376 493 aa27.89■■■□□ 2.06
NME3-206ENST00000564252 FGBP02675 491 aa27.89■■■□□ 2.06
NME3-206ENST00000564252 SYTL5Q8TDW5 730 aaPredicted RBP27.89■■■□□ 2.06
NME3-206ENST00000564252 UBAC1Q9BSL1 405 aa27.89■■■□□ 2.06
NME3-206ENST00000564252 COL25A1Q9BXS0 654 aaPredicted RBP27.89■■■□□ 2.06
NME3-206ENST00000564252 JMJD4Q9H9V9 463 aa27.89■■■□□ 2.06
NME3-206ENST00000564252 GPHNQ9NQX3 736 aaPredicted RBP27.89■■■□□ 2.06
NME3-206ENST00000564252 COL20A1Q9P218 1284 aa27.89■■■□□ 2.06
NME3-206ENST00000564252 RAD50Q92878 1312 aa27.89■■■□□ 2.05
NME3-206ENST00000564252 TXNP10599 105 aaKnown RBP27.88■■■□□ 2.05
NME3-206ENST00000564252 BRDTQ58F21 947 aaPredicted RBP27.88■■■□□ 2.05
NME3-206ENST00000564252 TTC22Q5TAA0 569 aa27.88■■■□□ 2.05
NME3-206ENST00000564252 VWCEQ96DN2 955 aa27.88■■■□□ 2.05
NME3-206ENST00000564252 TAAR1Q96RJ0 339 aa27.88■■■□□ 2.05
NME3-206ENST00000564252 SUPT20HL2P0C7V6 817 aa27.87■■■□□ 2.05
NME3-206ENST00000564252 TTLL4Q14679 1199 aa27.87■■■□□ 2.05
NME3-206ENST00000564252 NBPF20Q3BBV1 942 aa27.87■■■□□ 2.05
NME3-206ENST00000564252 IFIT1BQ5T764 474 aaKnown RBP27.87■■■□□ 2.05
NME3-206ENST00000564252 OTOP2Q7RTS6 562 aa27.87■■■□□ 2.05
NME3-206ENST00000564252 FBXO11Q86XK2 927 aa27.87■■■□□ 2.05
NME3-206ENST00000564252 SCLYQ96I15 445 aa27.87■■■□□ 2.05
NME3-206ENST00000564252 MTIF3Q9H2K0 278 aaKnown RBP27.87■■■□□ 2.05
NME3-206ENST00000564252 SUPT16HQ9Y5B9 1047 aaKnown RBP27.87■■■□□ 2.05
NME3-206ENST00000564252 DHX16O60231 1041 aaKnown RBP27.86■■■□□ 2.05
NME3-206ENST00000564252 KPNA6O60684 536 aa27.86■■■□□ 2.05
NME3-206ENST00000564252 CYP2C9P11712 490 aa27.86■■■□□ 2.05
NME3-206ENST00000564252 SEC23AQ15436 765 aa27.86■■■□□ 2.05
NME3-206ENST00000564252 CCDC62Q6P9F0 684 aa27.86■■■□□ 2.05
NME3-206ENST00000564252 MCF2L2Q86YR7 1114 aa27.86■■■□□ 2.05
NME3-206ENST00000564252 STAG2Q8N3U4 1231 aa27.86■■■□□ 2.05
NME3-206ENST00000564252 VAT1LQ9HCJ6 419 aa27.86■■■□□ 2.05
NME3-206ENST00000564252 MRPL11Q9Y3B7 192 aaKnown RBP27.86■■■□□ 2.05
NME3-206ENST00000564252 CYB5R4Q7L1T6 521 aa27.85■■■□□ 2.05
NME3-206ENST00000564252 NSUN6Q8TEA1 469 aaKnown RBP27.85■■■□□ 2.05
NME3-206ENST00000564252 GBF1Q92538 1859 aa27.85■■■□□ 2.05
NME3-206ENST00000564252 CHD7Q9P2D1 2997 aa27.84■■■□□ 2.05
NME3-206ENST00000564252 FAM47CQ5HY64 1035 aa27.84■■■□□ 2.05
NME3-206ENST00000564252 NFRKBQ6P4R8 1299 aa27.84■■■□□ 2.05
NME3-206ENST00000564252 RPUSD2Q8IZ73 545 aaKnown RBP27.84■■■□□ 2.05
NME3-206ENST00000564252 PPP1R13LQ8WUF5 828 aa27.84■■■□□ 2.05
NME3-206ENST00000564252 IWS1Q96ST2 819 aa27.84■■■□□ 2.05
NME3-206ENST00000564252 RMDN3Q96TC7 470 aa27.84■■■□□ 2.05
NME3-206ENST00000564252 KIAA1217Q5T5P2 1943 aa27.84■■■□□ 2.05
NME3-206ENST00000564252 RAB30Q15771 203 aa27.83■■■□□ 2.05
NME3-206ENST00000564252 SEPT14Q6ZU15 432 aa27.83■■■□□ 2.05
NME3-206ENST00000564252 MAD2L2Q9UI95 211 aa27.83■■■□□ 2.05
NME3-206ENST00000564252 OPLAHO14841 1288 aa27.82■■■□□ 2.04
NME3-206ENST00000564252 PTPN11Q06124 597 aaPredicted RBP27.82■■■□□ 2.04
NME3-206ENST00000564252 STXBP2Q15833 593 aa27.82■■■□□ 2.04
NME3-206ENST00000564252 LY6KQ17RY6 165 aa27.82■■■□□ 2.04
NME3-206ENST00000564252 MTMR8Q96EF0 704 aa27.82■■■□□ 2.04
NME3-206ENST00000564252 MSRAQ9UJ68 235 aa27.82■■■□□ 2.04
NME3-206ENST00000564252 SCN5AQ14524 2016 aa27.81■■■□□ 2.04
NME3-206ENST00000564252 KLRF2D3W0D1 207 aa27.81■■■□□ 2.04
NME3-206ENST00000564252 ARHGAP1Q07960 439 aa27.81■■■□□ 2.04
NME3-206ENST00000564252 USP38Q8NB14 1042 aa27.81■■■□□ 2.04
NME3-206ENST00000564252 AFG1LQ8WV93 481 aa27.81■■■□□ 2.04
NME3-206ENST00000564252 AMNQ9BXJ7 453 aa27.81■■■□□ 2.04
NME3-206ENST00000564252 YBX2Q9Y2T7 364 aaKnown RBP27.81■■■□□ 2.04
NME3-206ENST00000564252 PPP1R11O60927 126 aaPredicted RBP27.8■■■□□ 2.04
NME3-206ENST00000564252 CFBP00751 764 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 GH1P01241 217 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 PFKMP08237 780 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 MMP3P08254 477 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 CYP21A2P08686 494 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 EIF2AK2P19525 551 aaKnown RBP27.8■■■□□ 2.04
NME3-206ENST00000564252 CHMLP26374 656 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 HSD17B4P51659 736 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 GHRHRQ02643 423 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 PTH1RQ03431 593 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 ARHGEF16Q5VV41 709 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 NKX2-4Q9H2Z4 354 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 PRDM12Q9H4Q4 367 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 PXMP2Q9NR77 195 aa27.8■■■□□ 2.04
NME3-206ENST00000564252 TANC1Q9C0D5 1861 aa27.79■■■□□ 2.04
NME3-206ENST00000564252 PALM3A6NDB9 673 aaPredicted RBP27.79■■■□□ 2.04
NME3-206ENST00000564252 TRDNQ13061 729 aa27.79■■■□□ 2.04
NME3-206ENST00000564252 RUFY2Q8WXA3 655 aa27.79■■■□□ 2.04
NME3-206ENST00000564252 SLC4A7Q9Y6M7 1214 aa27.79■■■□□ 2.04
NME3-206ENST00000564252 PITPNM1O00562 1244 aa27.78■■■□□ 2.04
NME3-206ENST00000564252 ZBTB5O15062 677 aa27.78■■■□□ 2.04
NME3-206ENST00000564252 SLC35G1Q2M3R5 365 aa27.78■■■□□ 2.04
NME3-206ENST00000564252 DEFB128Q7Z7B8 93 aa27.78■■■□□ 2.04
NME3-206ENST00000564252 GAS2L1Q99501 681 aaPredicted RBP27.78■■■□□ 2.04
NME3-206ENST00000564252 U3KPZ7 1027 aaPredicted RBP27.78■■■□□ 2.04
NME3-206ENST00000564252 ZBBXA8MT70 800 aa27.77■■■□□ 2.04
NME3-206ENST00000564252 EIF3JO75822 258 aaKnown RBP27.77■■■□□ 2.04
NME3-206ENST00000564252 NR3C2P08235 984 aa27.77■■■□□ 2.04
NME3-206ENST00000564252 CHST3Q7LGC8 479 aa27.77■■■□□ 2.04
NME3-206ENST00000564252 DDX41Q9UJV9 622 aaKnown RBP27.77■■■□□ 2.04
NME3-206ENST00000564252 TAF6LQ9Y6J9 622 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms