RNA–Protein interactions for RNA: ENST00000564131.1

RRN3-206, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 1 (best) BASIC

Gene RRN3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-206ENST00000564131 PTPDC1A2A3K4 754 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 KIF28PB7ZC32 967 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 PARNO95453 639 aaKnown RBP12.74□□□□□ -0.37
RRN3-206ENST00000564131 MYL3P08590 195 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 PDHBP11177 359 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 SLC16A2P36021 539 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 RPS6P62753 249 aaKnown RBP12.74□□□□□ -0.37
RRN3-206ENST00000564131 BFSP2Q13515 415 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 SESTD1Q86VW0 696 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 HERC6Q8IVU3 1022 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 CAGE1Q8TC20 777 aa12.74□□□□□ -0.37
RRN3-206ENST00000564131 PLA2G5P39877 138 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 TAP1Q03518 808 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 PDE4DQ08499 809 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 RBL2Q08999 1139 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 VPS53Q5VIR6 699 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 SLC30A10Q6XR72 485 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 DEFB128Q7Z7B8 93 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 OTUD7AQ8TE49 926 aaPredicted RBP12.73□□□□□ -0.37
RRN3-206ENST00000564131 AFAP1L1Q8TED9 768 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 EVI5LQ96CN4 794 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
RRN3-206ENST00000564131 FGAP02671 866 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 CALML3P27482 149 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 TFF2Q03403 129 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 ZNF543Q08ER8 600 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 CCDC62Q6P9F0 684 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 CHMP4CQ96CF2 233 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 KIAA1217Q5T5P2 1943 aa12.72□□□□□ -0.37
RRN3-206ENST00000564131 PTPRSQ13332 1948 aa12.71□□□□□ -0.37
RRN3-206ENST00000564131 EPOPA6NHQ4 379 aa12.71□□□□□ -0.37
RRN3-206ENST00000564131 TLL1O43897 1013 aa12.71□□□□□ -0.37
RRN3-206ENST00000564131 CXCL10P02778 98 aa12.71□□□□□ -0.37
RRN3-206ENST00000564131 TXNP10599 105 aaKnown RBP12.71□□□□□ -0.37
RRN3-206ENST00000564131 GPATCH4Q5T3I0 446 aaKnown RBP12.71□□□□□ -0.37
RRN3-206ENST00000564131 CCDC155Q8N6L0 562 aa12.71□□□□□ -0.37
RRN3-206ENST00000564131 HLA-CQ95604 372 aa12.71□□□□□ -0.37
RRN3-206ENST00000564131 NECAB3Q96P71 396 aaPredicted RBP12.71□□□□□ -0.37
RRN3-206ENST00000564131 FTOQ9C0B1 505 aaKnown RBP eCLIP12.71□□□□□ -0.37
RRN3-206ENST00000564131 MTMR7Q9Y216 660 aa12.71□□□□□ -0.37
RRN3-206ENST00000564131 MUC6Q6W4X9 2439 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
RRN3-206ENST00000564131 RFXAPO00287 272 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 LPXNO60711 386 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 KCNQ1P51787 676 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 GPNMBQ14956 572 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 SKIV2LQ15477 1246 aaKnown RBP12.7□□□□□ -0.38
RRN3-206ENST00000564131 PTGISQ16647 500 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 MCMDC2Q4G0Z9 681 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 MICALL1Q8N3F8 863 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 EMID1Q96A84 441 aaPredicted RBP12.7□□□□□ -0.38
RRN3-206ENST00000564131 FAM122AQ96E09 287 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 CTAGE1Q96RT6 745 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 IWS1Q96ST2 819 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 GPCPD1Q9NPB8 672 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
RRN3-206ENST00000564131 EFCAB14O75071 495 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 ARHGEF15O94989 841 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 ARIH2O95376 493 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
RRN3-206ENST00000564131 SELPP16109 830 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
RRN3-206ENST00000564131 KCNJ6P48051 423 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 GRB10Q13322 594 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 NSUN6Q8TEA1 469 aaKnown RBP12.69□□□□□ -0.38
RRN3-206ENST00000564131 ARNTL2Q8WYA1 636 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 COPS5Q92905 334 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 RNF41Q9H4P4 317 aaPredicted RBP12.69□□□□□ -0.38
RRN3-206ENST00000564131 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 RAPGEFL1Q9UHV5 662 aa12.69□□□□□ -0.38
RRN3-206ENST00000564131 ABHD14A-ACY1A0A1B0GW23 586 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 GH1P01241 217 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 MMP3P08254 477 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 PDE1AP54750 535 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 WDR5P61964 334 aaKnown RBP12.68□□□□□ -0.38
RRN3-206ENST00000564131 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 CCDC178Q5BJE1 867 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 RRP12Q5JTH9 1297 aaKnown RBP12.68□□□□□ -0.38
RRN3-206ENST00000564131 CNKSR3Q6P9H4 555 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 MFSD6Q6ZSS7 791 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 LRRC8DQ7L1W4 858 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 SYTL5Q8TDW5 730 aaPredicted RBP12.68□□□□□ -0.38
RRN3-206ENST00000564131 AFG1LQ8WV93 481 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 ANKS1AQ92625 1134 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 KAT2BQ92831 832 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 CERS4Q9HA82 394 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 MYH6P13533 1939 aa12.68□□□□□ -0.38
RRN3-206ENST00000564131 ABCB11O95342 1321 aa12.67□□□□□ -0.38
RRN3-206ENST00000564131 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
RRN3-206ENST00000564131 GPR37L1O60883 481 aa12.67□□□□□ -0.38
RRN3-206ENST00000564131 GJB5O95377 273 aa12.67□□□□□ -0.38
RRN3-206ENST00000564131 HOXD8P13378 290 aaPredicted RBP12.67□□□□□ -0.38
RRN3-206ENST00000564131 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
RRN3-206ENST00000564131 ERVK-21P61565 698 aa12.67□□□□□ -0.38
RRN3-206ENST00000564131 GHRHRQ02643 423 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms