RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 SEC63Q9UGP8 760 aaKnown RBP11.16□□□□□ -0.62
UBFD1-203ENST00000564106 MAD2L2Q9UI95 211 aa11.16□□□□□ -0.62
UBFD1-203ENST00000564106 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-203ENST00000564106 COL6A3P12111 3177 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 F5H6K3 240 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 ADCY6O43306 1168 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 LETM1O95202 739 aaPredicted RBP11.15□□□□□ -0.62
UBFD1-203ENST00000564106 SNHG28P0DPA3 235 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 PDHBP11177 359 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 CNGA1P29973 690 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 KRT2P35908 639 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
UBFD1-203ENST00000564106 SNAP25P60880 206 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 KLRC3Q07444 240 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 ZNF792Q3KQV3 632 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 OLFML2BQ68BL8 750 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 DPP9Q86TI2 863 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 RIOX2Q8IUF8 465 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 DIS3L2Q8IYB7 885 aaKnown RBP11.15□□□□□ -0.62
UBFD1-203ENST00000564106 TRMT44Q8IYL2 757 aaKnown RBP11.15□□□□□ -0.62
UBFD1-203ENST00000564106 LEO1Q8WVC0 666 aaPredicted RBP11.15□□□□□ -0.62
UBFD1-203ENST00000564106 RRP36Q96EU6 259 aaKnown RBP11.15□□□□□ -0.62
UBFD1-203ENST00000564106 PHF20Q9BVI0 1012 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 SH2D4AQ9H788 454 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 GDPD2Q9HCC8 539 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 RTEL1Q9NZ71 1219 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 RCOR1Q9UKL0 485 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 IVNS1ABPQ9Y6Y0 642 aa11.15□□□□□ -0.62
UBFD1-203ENST00000564106 RBAK-RBAKDNI3L0D1 243 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 STAT3P40763 770 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 NASPP49321 788 aaPredicted RBP11.14□□□□□ -0.63
UBFD1-203ENST00000564106 PKN1Q16512 942 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 MFSD14CQ5VZR4 134 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 CAVIN1Q6NZI2 390 aaKnown RBP11.14□□□□□ -0.63
UBFD1-203ENST00000564106 FAM173BQ6P4H8 233 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
UBFD1-203ENST00000564106 MB21D1Q8N884 522 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 DCAF4Q8WV16 495 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 AIFM3Q96NN9 605 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 SLF1Q9BQI6 1058 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 SENP6Q9GZR1 1112 aaPredicted RBP11.14□□□□□ -0.63
UBFD1-203ENST00000564106 RAVER2Q9HCJ3 691 aaKnown RBP11.14□□□□□ -0.63
UBFD1-203ENST00000564106 NOL7Q9UMY1 257 aaKnown RBP11.14□□□□□ -0.63
UBFD1-203ENST00000564106 CEP131Q9UPN4 1083 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 NR2E3Q9Y5X4 410 aa11.14□□□□□ -0.63
UBFD1-203ENST00000564106 ASTN1O14525 1302 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 ZNF536O15090 1300 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 MYADML2A6NDP7 307 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 BMP15O95972 392 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 ZNF865P0CJ78 1059 aaPredicted RBP11.13□□□□□ -0.63
UBFD1-203ENST00000564106 NLRP5P59047 1200 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
UBFD1-203ENST00000564106 ZNF543Q08ER8 600 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 STK38Q15208 465 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 SF3A1Q15459 793 aaKnown RBP11.13□□□□□ -0.63
UBFD1-203ENST00000564106 SNRNP48Q6IEG0 339 aaKnown RBP11.13□□□□□ -0.63
UBFD1-203ENST00000564106 STAG2Q8N3U4 1231 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 GMCL1P1Q8NEA9 526 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 GPT2Q8TD30 523 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 USP28Q96RU2 1077 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 MMP19Q99542 508 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 MROH8Q9H579 483 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
UBFD1-203ENST00000564106 TFIP11Q9UBB9 837 aaKnown RBP11.13□□□□□ -0.63
UBFD1-203ENST00000564106 DNAJC25-GNG10A0A024R161 153 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 STRNO43815 780 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 SNAI1O95863 264 aaPredicted RBP11.12□□□□□ -0.63
UBFD1-203ENST00000564106 GNA11P29992 359 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 TRAPPC10P48553 1259 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 TRAF1Q13077 416 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 LRRC41Q15345 812 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 CCDC183Q5T5S1 534 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 PPP1R18Q6NYC8 613 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 Q7L0L9 218 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 ABRAQ8N0Z2 381 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 CPXCR1Q8N123 301 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 DAGLBQ8NCG7 672 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 BICD2Q8TD16 824 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 FERMT2Q96AC1 680 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 KIFC2Q96AC6 838 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 CHAMP1Q96JM3 812 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
UBFD1-203ENST00000564106 RIOX1Q9H6W3 641 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 SLC38A10Q9HBR0 1119 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 DDX19AQ9NUU7 478 aaKnown RBP11.12□□□□□ -0.63
UBFD1-203ENST00000564106 BARHL2Q9NY43 387 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 VPS54Q9P1Q0 977 aa11.12□□□□□ -0.63
UBFD1-203ENST00000564106 MORC2Q9Y6X9 1032 aaPredicted RBP11.12□□□□□ -0.63
UBFD1-203ENST00000564106 ESYT2A0FGR8 921 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 BTBD18B2RXH4 712 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 KIF28PB7ZC32 967 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 SPTLC2O15270 562 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 SEPT4O43236 478 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 PPP6R2O75170 966 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 GADD45BO75293 160 aaPredicted RBP11.11□□□□□ -0.63
UBFD1-203ENST00000564106 PGK1P00558 417 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 FCER1AP12319 257 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms