RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PTMSP20962 102 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 MCM4P33991 863 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 RPS6P62753 249 aaKnown RBP14.72□□□□□ -0.05
SPG7-209ENST00000564047 DNM1Q05193 864 aaKnown RBP14.72□□□□□ -0.05
SPG7-209ENST00000564047 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
SPG7-209ENST00000564047 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
SPG7-209ENST00000564047 NSMFQ6X4W1 530 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 OTOP1Q7RTM1 612 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 SYTL5Q8TDW5 730 aaPredicted RBP14.72□□□□□ -0.05
SPG7-209ENST00000564047 GBP4Q96PP9 640 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 ANO3Q9BYT9 981 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 R3HDMLQ9H3Y0 253 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 EHMT1Q9H9B1 1298 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 A1CFQ9NQ94 594 aaKnown RBP14.72□□□□□ -0.05
SPG7-209ENST00000564047 CPA4Q9UI42 421 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 CFAP45Q9UL16 551 aa14.72□□□□□ -0.05
SPG7-209ENST00000564047 PFASO15067 1338 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 BAG4O95429 457 aaKnown RBP14.71□□□□□ -0.05
SPG7-209ENST00000564047 TOB1P50616 345 aaPredicted RBP14.71□□□□□ -0.05
SPG7-209ENST00000564047 KRT85P78386 507 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 CRHR2Q13324 411 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 BAATQ14032 418 aaPredicted RBP14.71□□□□□ -0.05
SPG7-209ENST00000564047 INF2Q27J81 1249 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 SLC30A10Q6XR72 485 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 FCHSD1Q86WN1 690 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 ANKRD35Q8N283 1001 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 TBCKQ8TEA7 893 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 PGBD1Q96JS3 809 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 PORCNQ9H237 461 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 CYP39A1Q9NYL5 469 aa14.71□□□□□ -0.05
SPG7-209ENST00000564047 COLQQ9Y215 455 aaPredicted RBP14.71□□□□□ -0.05
SPG7-209ENST00000564047 DDX11L8A8MPP1 907 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 MAPK4P31152 587 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 SREBF1P36956 1147 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 USP11P51784 963 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 KCTD2Q14681 263 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 TTC38Q5R3I4 469 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 NEK8Q86SG6 692 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 CCAR1Q8IX12 1150 aaKnown RBP14.7□□□□□ -0.06
SPG7-209ENST00000564047 CRYGNQ8WXF5 182 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 USP28Q96RU2 1077 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 NAP1L4Q99733 375 aaKnown RBP14.7□□□□□ -0.06
SPG7-209ENST00000564047 EFCC1Q9HA90 598 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 POLR3EQ9NVU0 708 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 RTEL1Q9NZ71 1219 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 COL20A1Q9P218 1284 aa14.7□□□□□ -0.06
SPG7-209ENST00000564047 FRMPD4Q14CM0 1322 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 RPTORQ8N122 1335 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 STRNO43815 780 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 FCER1AP12319 257 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 EN2P19622 333 aaPredicted RBP14.69□□□□□ -0.06
SPG7-209ENST00000564047 NASPP49321 788 aaPredicted RBP14.69□□□□□ -0.06
SPG7-209ENST00000564047 ORC2Q13416 577 aaPredicted RBP14.69□□□□□ -0.06
SPG7-209ENST00000564047 ANO1Q5XXA6 986 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 ABRAQ8N0Z2 381 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 ERO1AQ96HE7 468 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 CHAMP1Q96JM3 812 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 TAAR1Q96RJ0 339 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 MMP19Q99542 508 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 TMEM106CQ9BVX2 250 aa14.69□□□□□ -0.06
SPG7-209ENST00000564047 SCAND2PQ9GZW5 306 aaPredicted RBP14.69□□□□□ -0.06
SPG7-209ENST00000564047 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.69□□□□□ -0.06
SPG7-209ENST00000564047 TFIP11Q9UBB9 837 aaKnown RBP14.69□□□□□ -0.06
SPG7-209ENST00000564047 CUL9Q8IWT3 2517 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 POTEB2H3BUK9 544 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 YEATS4O95619 227 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 BMP15O95972 392 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 CYP3A4P08684 503 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 GCFC2P16383 781 aaKnown RBP14.68□□□□□ -0.06
SPG7-209ENST00000564047 NCLP19338 710 aaKnown RBP14.68□□□□□ -0.06
SPG7-209ENST00000564047 ATP2B1P20020 1258 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 ARHGAP4P98171 946 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 SF3A1Q15459 793 aaKnown RBP14.68□□□□□ -0.06
SPG7-209ENST00000564047 LETM2Q2VYF4 491 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 WDR78Q5VTH9 848 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 PPP4R3AQ6IN85 833 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 MOXD1Q6UVY6 613 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 DNERQ8NFT8 737 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 ARMC5Q96C12 935 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 RCOR1Q9UKL0 485 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 CEP131Q9UPN4 1083 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 CNPY2Q9Y2B0 182 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 PTPN22Q9Y2R2 807 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 PCDHB6Q9Y5E3 794 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 CLIC4Q9Y696 253 aa14.68□□□□□ -0.06
SPG7-209ENST00000564047 DNAJC25-GNG10A0A024R161 153 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 CYP3A7-CYP3A51PA0A087WV96 503 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 DLL1O00548 723 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 EDIL3O43854 480 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 PTPREP23469 700 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 CYP3A7P24462 503 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 CIITAP33076 1130 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 CEBPZQ03701 1054 aaKnown RBP14.67□□□□□ -0.06
SPG7-209ENST00000564047 CSPP1Q1MSJ5 1256 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 ARHGEF16Q5VV41 709 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 XRRA1Q6P2D8 792 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 GPR142Q7Z601 462 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 PLEKHH3Q7Z736 793 aa14.67□□□□□ -0.06
SPG7-209ENST00000564047 FAM133AQ8N9E0 248 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms