RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 ZSWIM5Q9P217 1185 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
CLN6-203ENST00000563917 ZBBXA8MT70 800 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 PFKMP08237 780 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 PTPN11Q06124 597 aaPredicted RBP11.13□□□□□ -0.63
CLN6-203ENST00000563917 OTOP2Q7RTS6 562 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 RALYLQ86SE5 291 aaKnown RBP11.13□□□□□ -0.63
CLN6-203ENST00000563917 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 ENAHQ8N8S7 591 aaPredicted RBP11.13□□□□□ -0.63
CLN6-203ENST00000563917 HERVK_113Q902F9 699 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 IWS1Q96ST2 819 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 RMDN3Q96TC7 470 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 NOC4LQ9BVI4 516 aaKnown RBP11.13□□□□□ -0.63
CLN6-203ENST00000563917 AMNQ9BXJ7 453 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 CPVLQ9H3G5 476 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 SLC28A3Q9HAS3 691 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 SLC4A7Q9Y6M7 1214 aa11.13□□□□□ -0.63
CLN6-203ENST00000563917 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 CFBP00751 764 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 GH1P01241 217 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 PTGS1P23219 599 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 EDNRBP24530 442 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 BFSP2Q13515 415 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 QRICH1Q2TAL8 776 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 TMEM63BQ5T3F8 832 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 NFRKBQ6P4R8 1299 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 SEPT14Q6ZU15 432 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 C16orf59Q7L2K0 433 aa11.12□□□□□ -0.63
CLN6-203ENST00000563917 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
CLN6-203ENST00000563917 SUPT16HQ9Y5B9 1047 aaKnown RBP11.12□□□□□ -0.63
CLN6-203ENST00000563917 GRIN2DO15399 1336 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 A6NJR5 290 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 KLRF2D3W0D1 207 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 IFIT3O14879 490 aaKnown RBP11.11□□□□□ -0.63
CLN6-203ENST00000563917 CASTP20810 708 aaKnown RBP11.11□□□□□ -0.63
CLN6-203ENST00000563917 RFC2P35250 354 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 GRIN2CQ14957 1233 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 NBPF20Q3BBV1 942 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 TTC22Q5TAA0 569 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 RASIP1Q5U651 963 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 CHST3Q7LGC8 479 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 SYTL5Q8TDW5 730 aaPredicted RBP11.11□□□□□ -0.63
CLN6-203ENST00000563917 TAAR1Q96RJ0 339 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 TRMT13Q9NUP7 481 aaKnown RBP11.11□□□□□ -0.63
CLN6-203ENST00000563917 MAP3K20Q9NYL2 800 aaKnown RBP11.11□□□□□ -0.63
CLN6-203ENST00000563917 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 MRVI1Q9Y6F6 885 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 LAMA4Q16363 1823 aa11.11□□□□□ -0.63
CLN6-203ENST00000563917 UMODL1Q5DID0 1318 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 GRXCR1A8MXD5 290 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 ZBTB5O15062 677 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 EIF3JO75822 258 aaKnown RBP11.1□□□□□ -0.63
CLN6-203ENST00000563917 CYP2C9P11712 490 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 EIF2AK2P19525 551 aaKnown RBP11.1□□□□□ -0.63
CLN6-203ENST00000563917 DGKDQ16760 1214 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 KCNV1Q6PIU1 500 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 DEFB128Q7Z7B8 93 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 HOMER1Q86YM7 354 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 COPS5Q92905 334 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 SCLYQ96I15 445 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 KATNAL1Q9BW62 490 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 FTOQ9C0B1 505 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLN6-203ENST00000563917 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
CLN6-203ENST00000563917 JMJD4Q9H9V9 463 aa11.1□□□□□ -0.63
CLN6-203ENST00000563917 LCTP09848 1927 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 KIF28PB7ZC32 967 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 NR3C2P08235 984 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 MMP3P08254 477 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 MYCLP12524 364 aaPredicted RBP11.09□□□□□ -0.63
CLN6-203ENST00000563917 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
CLN6-203ENST00000563917 IGFBP4P22692 258 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 PBX2P40425 430 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 WTAPQ15007 396 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 PTGISQ16647 500 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 LY6KQ17RY6 165 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 PPP2R2DQ66LE6 453 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 DHX37Q8IY37 1157 aaKnown RBP11.09□□□□□ -0.63
CLN6-203ENST00000563917 C7orf31Q8N865 590 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 AFG1LQ8WV93 481 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 PPM1EQ8WY54 764 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 TBC1D5Q92609 795 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 COL25A1Q9BXS0 654 aaPredicted RBP11.09□□□□□ -0.63
CLN6-203ENST00000563917 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
CLN6-203ENST00000563917 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
CLN6-203ENST00000563917 MYH6P13533 1939 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 GCOM1H8Y6P7 765 aaPredicted RBP11.08□□□□□ -0.64
CLN6-203ENST00000563917 PARNO95453 639 aaKnown RBP11.08□□□□□ -0.64
CLN6-203ENST00000563917 POLR2MP0CAP2 368 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 KCNJ6P48051 423 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 TMEM67Q5HYA8 995 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 CCDC62Q6P9F0 684 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 STAG2Q8N3U4 1231 aa11.08□□□□□ -0.64
CLN6-203ENST00000563917 CAGE1Q8TC20 777 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms