RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 TOB2Q14106 344 aaPredicted RBP23.43■■□□□ 1.34
CMTM3-206ENST00000563672 PRPF38BQ5VTL8 546 aaKnown RBP23.43■■□□□ 1.34
CMTM3-206ENST00000563672 IL17RAQ96F46 866 aa23.43■■□□□ 1.34
CMTM3-206ENST00000563672 UPF3BQ9BZI7 483 aaKnown RBP23.43■■□□□ 1.34
CMTM3-206ENST00000563672 NAP1L2Q9ULW6 460 aaPredicted RBP23.43■■□□□ 1.34
CMTM3-206ENST00000563672 PHF24Q9UPV7 400 aa23.43■■□□□ 1.34
CMTM3-206ENST00000563672 CCDC196A0A1B0GTZ2 297 aa23.42■■□□□ 1.34
CMTM3-206ENST00000563672 CST5P28325 142 aaPredicted RBP23.42■■□□□ 1.34
CMTM3-206ENST00000563672 TMEM63BQ5T3F8 832 aa23.42■■□□□ 1.34
CMTM3-206ENST00000563672 ARHGEF16Q5VV41 709 aa23.42■■□□□ 1.34
CMTM3-206ENST00000563672 CCSAPQ6IQ19 270 aaPredicted RBP23.42■■□□□ 1.34
CMTM3-206ENST00000563672 TSEN34Q9BSV6 310 aaKnown RBP23.42■■□□□ 1.34
CMTM3-206ENST00000563672 PXMP2Q9NR77 195 aa23.42■■□□□ 1.34
CMTM3-206ENST00000563672 LRRC37A2A6NM11 1700 aa23.42■■□□□ 1.34
CMTM3-206ENST00000563672 CTAGE5O15320 804 aa23.41■■□□□ 1.34
CMTM3-206ENST00000563672 EVI5O60447 810 aa23.41■■□□□ 1.34
CMTM3-206ENST00000563672 PDIA3P30101 505 aaKnown RBP23.41■■□□□ 1.34
CMTM3-206ENST00000563672 IRX5P78411 483 aaPredicted RBP23.41■■□□□ 1.34
CMTM3-206ENST00000563672 SPC25Q9HBM1 224 aa23.41■■□□□ 1.34
CMTM3-206ENST00000563672 Q9Y3F1 56 aa23.41■■□□□ 1.34
CMTM3-206ENST00000563672 V9GY48 417 aaPredicted RBP23.41■■□□□ 1.34
CMTM3-206ENST00000563672 CEP290O15078 2479 aa23.41■■□□□ 1.34
CMTM3-206ENST00000563672 MYADML2A6NDP7 307 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 NR3C2P08235 984 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 EIF2AK2P19525 551 aaKnown RBP23.4■■□□□ 1.34
CMTM3-206ENST00000563672 STXBP2Q15833 593 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 LRRC26Q2I0M4 334 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 C8orf34Q49A92 452 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 DUSP28Q4G0W2 176 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 NOL8Q76FK4 1167 aaKnown RBP23.4■■□□□ 1.34
CMTM3-206ENST00000563672 WDR11Q9BZH6 1224 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 PDRG1Q9NUG6 133 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 NR2E3Q9Y5X4 410 aa23.4■■□□□ 1.34
CMTM3-206ENST00000563672 PIK3CDO00329 1044 aa23.39■■□□□ 1.33
CMTM3-206ENST00000563672 C6orf222P0C671 652 aaPredicted RBP23.39■■□□□ 1.33
CMTM3-206ENST00000563672 PTGS1P23219 599 aa23.39■■□□□ 1.33
CMTM3-206ENST00000563672 KCNA10Q16322 511 aa23.39■■□□□ 1.33
CMTM3-206ENST00000563672 FERMT2Q96AC1 680 aa23.39■■□□□ 1.33
CMTM3-206ENST00000563672 PDCD2LQ9BRP1 358 aa23.39■■□□□ 1.33
CMTM3-206ENST00000563672 H0YGN5 161 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 MEIS2O14770 477 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 ACLYP53396 1101 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 GNASQ5JWF2 1037 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 WWC2Q6AWC2 1192 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 SLC39A5Q6ZMH5 540 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 TLK2Q86UE8 772 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 FCHSD1Q86WN1 690 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 SCFD2Q8WU76 684 aa23.38■■□□□ 1.33
CMTM3-206ENST00000563672 ALDH8A1Q9H2A2 487 aaPredicted RBP23.38■■□□□ 1.33
CMTM3-206ENST00000563672 MOXD2PA6NHM9 499 aa23.37■■□□□ 1.33
CMTM3-206ENST00000563672 DYNC1LI2O43237 492 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-206ENST00000563672 EIF3JO75822 258 aaKnown RBP23.37■■□□□ 1.33
CMTM3-206ENST00000563672 ATN1P54259 1190 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-206ENST00000563672 PGM5Q15124 567 aa23.37■■□□□ 1.33
CMTM3-206ENST00000563672 NTRK3Q16288 839 aa23.37■■□□□ 1.33
CMTM3-206ENST00000563672 USP17L6PQ6QN14 398 aa23.37■■□□□ 1.33
CMTM3-206ENST00000563672 HEATR3Q7Z4Q2 680 aa23.37■■□□□ 1.33
CMTM3-206ENST00000563672 VSIG10LQ86VR7 867 aa23.37■■□□□ 1.33
CMTM3-206ENST00000563672 PCSK9Q8NBP7 692 aaKnown RBP23.37■■□□□ 1.33
CMTM3-206ENST00000563672 GPKOWQ92917 476 aaPredicted RBP eCLIP23.37■■□□□ 1.33
CMTM3-206ENST00000563672 ZNF274Q96GC6 653 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-206ENST00000563672 AP5M1Q9H0R1 490 aa23.37■■□□□ 1.33
CMTM3-206ENST00000563672 PSTPIP2Q9H939 334 aa23.37■■□□□ 1.33
CMTM3-206ENST00000563672 FRMPD4Q14CM0 1322 aa23.36■■□□□ 1.33
CMTM3-206ENST00000563672 A0A1W2PQ45 241 aaPredicted RBP23.36■■□□□ 1.33
CMTM3-206ENST00000563672 A0A1W2PQY0 241 aa23.36■■□□□ 1.33
CMTM3-206ENST00000563672 NKRFO15226 690 aaKnown RBP eCLIP23.36■■□□□ 1.332e-6■■■□□ 16.7
CMTM3-206ENST00000563672 SNX17Q15036 470 aa23.36■■□□□ 1.33
CMTM3-206ENST00000563672 C1orf53Q5VUE5 145 aa23.36■■□□□ 1.33
CMTM3-206ENST00000563672 TYW1BQ6NUM6 668 aa23.36■■□□□ 1.33
CMTM3-206ENST00000563672 CCDC62Q6P9F0 684 aa23.36■■□□□ 1.33
CMTM3-206ENST00000563672 CUL5Q93034 780 aa23.36■■□□□ 1.33
CMTM3-206ENST00000563672 hCG_1984214I3L0E3 225 aa23.35■■□□□ 1.33
CMTM3-206ENST00000563672 ARIH2O95376 493 aa23.35■■□□□ 1.33
CMTM3-206ENST00000563672 ASGR1P07306 291 aa23.35■■□□□ 1.33
CMTM3-206ENST00000563672 BEX3Q00994 111 aa23.35■■□□□ 1.33
CMTM3-206ENST00000563672 TTLL4Q14679 1199 aa23.35■■□□□ 1.33
CMTM3-206ENST00000563672 C7orf61Q8IZ16 206 aa23.35■■□□□ 1.33
CMTM3-206ENST00000563672 ZNF713Q8N859 430 aaPredicted RBP23.35■■□□□ 1.33
CMTM3-206ENST00000563672 IL31RAQ8NI17 732 aa23.35■■□□□ 1.33
CMTM3-206ENST00000563672 SMARCC2Q8TAQ2 1214 aa23.35■■□□□ 1.33
CMTM3-206ENST00000563672 LARP6Q9BRS8 491 aaKnown RBP23.35■■□□□ 1.33
CMTM3-206ENST00000563672 ALPK3Q96L96 1907 aa23.34■■□□□ 1.33
CMTM3-206ENST00000563672 STXBP3O00186 592 aa23.34■■□□□ 1.33
CMTM3-206ENST00000563672 PRPF3O43395 683 aaKnown RBP23.34■■□□□ 1.33
CMTM3-206ENST00000563672 RGS20O76081 388 aa23.34■■□□□ 1.33
CMTM3-206ENST00000563672 TXNP10599 105 aaKnown RBP23.34■■□□□ 1.33
CMTM3-206ENST00000563672 MYCLP12524 364 aaPredicted RBP23.34■■□□□ 1.33
CMTM3-206ENST00000563672 IFNAR1P17181 557 aa23.34■■□□□ 1.33
CMTM3-206ENST00000563672 CCT2P78371 535 aaKnown RBP23.34■■□□□ 1.33
CMTM3-206ENST00000563672 FSCN1Q16658 493 aaKnown RBP23.34■■□□□ 1.33
CMTM3-206ENST00000563672 PFKFB3Q16875 520 aaPredicted RBP23.34■■□□□ 1.33
CMTM3-206ENST00000563672 PPP1R18Q6NYC8 613 aa23.34■■□□□ 1.33
CMTM3-206ENST00000563672 SEPT14Q6ZU15 432 aa23.34■■□□□ 1.33
CMTM3-206ENST00000563672 NCOA5Q9HCD5 579 aaKnown RBP23.34■■□□□ 1.33
CMTM3-206ENST00000563672 BARHL2Q9NY43 387 aa23.34■■□□□ 1.33
CMTM3-206ENST00000563672 DNAH12Q6ZR08 3092 aa23.34■■□□□ 1.33
CMTM3-206ENST00000563672 CCND2P30279 289 aa23.33■■□□□ 1.33
CMTM3-206ENST00000563672 RTP1P59025 263 aa23.33■■□□□ 1.33
CMTM3-206ENST00000563672 PKN1Q16512 942 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms