RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SIRT5Q9NXA8 310 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.36□□□□□ -1.23
LINC00254-201ENST00000563416 RWDD3Q9Y3V2 267 aa7.36□□□□□ -1.23
LINC00254-201ENST00000563416 AQRO60306 1485 aaKnown RBP eCLIP7.36□□□□□ -1.23
LINC00254-201ENST00000563416 DBHP09172 617 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 SDHBP21912 280 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 GLDCP23378 1020 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 GTF2A2P52657 109 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 YBX1P67809 324 aaKnown RBP7.35□□□□□ -1.23
LINC00254-201ENST00000563416 MAP4K2Q12851 820 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 SERINC3Q13530 473 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 PPIL6Q8IXY8 311 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 PMFBP1Q8TBY8 1022 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 IER2Q9BTL4 223 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 GULP1Q9UBP9 304 aa7.35□□□□□ -1.23
LINC00254-201ENST00000563416 DBR1Q9UK59 544 aaKnown RBP7.35□□□□□ -1.23
LINC00254-201ENST00000563416 ADAMTS12P58397 1594 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 TRAV20A0A0B4J274 112 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 MYOCOSA0A1B0GUC4 107 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 TCAF2A6NFQ2 919 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 RAP1GAPP47736 663 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 MAPKAPK2P49137 400 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 RPL11P62913 178 aaKnown RBP7.34□□□□□ -1.23
LINC00254-201ENST00000563416 CYP4F3Q08477 520 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 CBX2Q14781 532 aaPredicted RBP7.34□□□□□ -1.23
LINC00254-201ENST00000563416 ZC3H14Q6PJT7 736 aaKnown RBP7.34□□□□□ -1.23
LINC00254-201ENST00000563416 RPTNQ6XPR3 784 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 TMEM145Q8NBT3 493 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 MKL1Q969V6 931 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 DEPDC7Q96QD5 511 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 SPATA9Q9BWV2 254 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 KCNK12Q9HB15 430 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 KLHL14Q9P2G3 628 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 NUDT5Q9UKK9 219 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 GRIN2BQ13224 1484 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 GAPVD1Q14C86 1478 aa7.34□□□□□ -1.23
LINC00254-201ENST00000563416 MAGI1Q96QZ7 1491 aaPredicted RBP7.34□□□□□ -1.23
LINC00254-201ENST00000563416 ETV2O00321 342 aaPredicted RBP7.33□□□□□ -1.24
LINC00254-201ENST00000563416 CAPNS1P04632 268 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 MED14OSP0DP75 135 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 FGFR1P11362 822 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 VIPR1P32241 457 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 LTBRP36941 435 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 GRIA2P42262 883 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 SSRP1Q08945 709 aaKnown RBP7.33□□□□□ -1.24
LINC00254-201ENST00000563416 TESK1Q15569 626 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 SF1Q15637 639 aaKnown RBP7.33□□□□□ -1.24
LINC00254-201ENST00000563416 PRSS53Q2L4Q9 553 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 NETO2Q8NC67 525 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 KREMEN2Q8NCW0 462 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 SRPK1Q96SB4 655 aaKnown RBP7.33□□□□□ -1.24
LINC00254-201ENST00000563416 DNAJC2Q99543 621 aaKnown RBP7.33□□□□□ -1.24
LINC00254-201ENST00000563416 MARCH2Q9P0N8 246 aa7.33□□□□□ -1.24
LINC00254-201ENST00000563416 TIMM13Q9Y5L4 95 aaPredicted RBP7.33□□□□□ -1.24
LINC00254-201ENST00000563416 ERICH3Q5RHP9 1530 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 SNAPC4Q5SXM2 1469 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 GLI4P10075 376 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 DLG4P78352 724 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 RASA3Q14644 834 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 ZNF124Q15973 351 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 INF2Q27J81 1249 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 PLEKHN1Q494U1 663 aaPredicted RBP7.32□□□□□ -1.24
LINC00254-201ENST00000563416 SLC35F1Q5T1Q4 408 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 MBLAC2Q68D91 279 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 NSMFQ6X4W1 530 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 SPATC1Q76KD6 591 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 DPH6Q7L8W6 267 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 TMC6Q7Z403 805 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 ANKLE2Q86XL3 938 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 UBXN4Q92575 508 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 IPO9Q96P70 1041 aaKnown RBP7.32□□□□□ -1.24
LINC00254-201ENST00000563416 MTA3Q9BTC8 594 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 ARHGEF4Q9NR80 690 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 BTG4Q9NY30 223 aa7.32□□□□□ -1.24
LINC00254-201ENST00000563416 TDRD9Q8NDG6 1382 aaKnown RBP7.32□□□□□ -1.24
LINC00254-201ENST00000563416 F8W031 263 aaPredicted RBP7.31□□□□□ -1.24
LINC00254-201ENST00000563416 PRODHO43272 600 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 FUCA1P04066 466 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 WWC2Q6AWC2 1192 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 ATG14Q6ZNE5 492 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 PEX11GQ96HA9 241 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 OSBPL2Q9H1P3 480 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 SNTG2Q9NY99 539 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 TMEFF2Q9UIK5 374 aaPredicted RBP7.31□□□□□ -1.24
LINC00254-201ENST00000563416 MBD1Q9UIS9 605 aaPredicted RBP7.31□□□□□ -1.24
LINC00254-201ENST00000563416 CUL7Q14999 1698 aa7.31□□□□□ -1.24
LINC00254-201ENST00000563416 DLX3O60479 287 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 C1QTNF9P0C862 333 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
LINC00254-201ENST00000563416 NFE2L2Q16236 605 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 USP53Q70EK8 1073 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 DCP2Q8IU60 420 aaKnown RBP7.3□□□□□ -1.24
LINC00254-201ENST00000563416 CCDC103Q8IW40 242 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 RCBTB1Q8NDN9 531 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 CHAMP1Q96JM3 812 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 CDC6Q99741 560 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 CLASP1Q7Z460 1538 aa7.3□□□□□ -1.24
LINC00254-201ENST00000563416 SYNJ2O15056 1496 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms