RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 SKAP1Q86WV1 359 aa14.18□□□□□ -0.14
NSMCE1-204ENST00000563273 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
NSMCE1-204ENST00000563273 TBC1D5Q92609 795 aa14.18□□□□□ -0.14
NSMCE1-204ENST00000563273 TRIM43Q96BQ3 446 aaPredicted RBP14.18□□□□□ -0.14
NSMCE1-204ENST00000563273 RMDN3Q96TC7 470 aa14.18□□□□□ -0.14
NSMCE1-204ENST00000563273 POLR3EQ9NVU0 708 aa14.18□□□□□ -0.14
NSMCE1-204ENST00000563273 COL20A1Q9P218 1284 aa14.18□□□□□ -0.14
NSMCE1-204ENST00000563273 KPNA6O60684 536 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 NEFLP07196 543 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 BEX3Q00994 111 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 KRT32Q14532 448 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 TTLL4Q14679 1199 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 STXBP2Q15833 593 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 BRDTQ58F21 947 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 CCDC62Q6P9F0 684 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 SH3RF1Q7Z6J0 888 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 TAAR1Q96RJ0 339 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 PIGSQ96S52 555 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 PRDM5Q9NQX1 630 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 TMEM39AQ9NV64 488 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 TBX21Q9UL17 535 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 LCTP09848 1927 aa14.17□□□□□ -0.14
NSMCE1-204ENST00000563273 CCDC69A6NI79 296 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 A6NJR5 290 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 EPB41L2O43491 1005 aaKnown RBP14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 EIF3JO75822 258 aaKnown RBP14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 CFBP00751 764 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 ARHGEF16Q5VV41 709 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 CXCL17Q6UXB2 119 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 FAM126BQ8IXS8 530 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 BADQ92934 168 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 KCNB2Q92953 911 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 VTI1AQ96AJ9 217 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 NEK1Q96PY6 1258 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 PXMP2Q9NR77 195 aa14.16□□□□□ -0.14
NSMCE1-204ENST00000563273 GCOM1H8Y6P7 765 aaPredicted RBP14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 SOX1O00570 391 aaPredicted RBP14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 TLR3O15455 904 aaKnown RBP14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 TIMP1P01033 207 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 CD4P01730 458 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 NR3C2P08235 984 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 HMGB1P09429 215 aaKnown RBP14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 RAG1P15918 1043 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 PURAQ00577 322 aaKnown RBP14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 ITGA7Q13683 1181 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 TMEM63BQ5T3F8 832 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 NFXL1Q6ZNB6 911 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 HOMER1Q86YM7 354 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 TEX2Q8IWB9 1127 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 OR6J1Q8NGC5 347 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 RRP36Q96EU6 259 aaKnown RBP14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 PDCD2LQ9BRP1 358 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 GPHNQ9NQX3 736 aaPredicted RBP14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 SLC12A7Q9Y666 1083 aa14.15□□□□□ -0.14
NSMCE1-204ENST00000563273 TXNP10599 105 aaKnown RBP14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 ITGB8P26012 769 aa14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 RCAN1P53805 252 aa14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 EXOSC10Q01780 885 aaKnown RBP14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 KCNV1Q6PIU1 500 aa14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 DHX32Q7L7V1 743 aaKnown RBP14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 VSIG10LQ86VR7 867 aa14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 EMID1Q96A84 441 aaPredicted RBP14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 MCM3APO60318 1980 aa14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 GRIN2DO15399 1336 aa14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 FRMPD4Q14CM0 1322 aa14.14□□□□□ -0.15
NSMCE1-204ENST00000563273 PIK3CDO00329 1044 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 STAM2O75886 525 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 ARIH2O95376 493 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 GH1P01241 217 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 TGFB3P10600 412 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 EIF2AK2P19525 551 aaKnown RBP14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 PTGS1P23219 599 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 COL9A3Q14050 684 aaPredicted RBP14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 MFSD5Q6N075 450 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 RASEFQ8IZ41 740 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 FANCBQ8NB91 859 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 MTG1Q9BT17 334 aaPredicted RBP14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 MYL10Q9BUA6 226 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 SEC63Q9UGP8 760 aaKnown RBP14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 LTBP2Q14767 1821 aa14.13□□□□□ -0.15
NSMCE1-204ENST00000563273 REC8O95072 547 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 FPGSQ05932 587 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 PTPN11Q06124 597 aaPredicted RBP14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 PGM5Q15124 567 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 FAM109BQ6ICB4 259 aaPredicted RBP14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 APOA5Q6Q788 366 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 SYNE3Q6ZMZ3 975 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 TMTC3Q6ZXV5 915 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 FBXL16Q8N461 479 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 SRBD1Q8N5C6 995 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 LRCH3Q96II8 777 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 RBM28Q9NW13 759 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 DDX41Q9UJV9 622 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 SZT2Q5T011 3432 aa14.12□□□□□ -0.15
NSMCE1-204ENST00000563273 PLEKHA8P1O95397 391 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 SUPT20HL2P0C7V6 817 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 HOXD8P13378 290 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms