RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 RCCD1A6NED2 376 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 GOLGA8HP0CJ92 632 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 IDEP14735 1019 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 GYS2P54840 703 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 GRB10Q13322 594 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 DIXDC1Q155Q3 683 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 SLC44A5Q8NCS7 719 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 CAGE1Q8TC20 777 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 LARP4BQ92615 738 aaKnown RBP14.56□□□□□ -0.08
USB1-207ENST00000563149 NDST4Q9H3R1 872 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 LRWD1Q9UFC0 647 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 SIK3Q9Y2K2 1263 aa14.56□□□□□ -0.08
USB1-207ENST00000563149 TNRC6CQ9HCJ0 1690 aaKnown RBP14.56□□□□□ -0.08
USB1-207ENST00000563149 N4BP1O75113 896 aaKnown RBP14.55□□□□□ -0.08
USB1-207ENST00000563149 BTDP43251 543 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 KLK7P49862 253 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 SEPT2Q15019 361 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 CALCRLQ16602 461 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 CCNI2Q6ZMN8 369 aaPredicted RBP14.55□□□□□ -0.08
USB1-207ENST00000563149 TEX11Q8IYF3 940 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 GOLGA6L1Q8N7Z2 621 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 COG1Q8WTW3 980 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 CDK5RAP3Q96JB5 506 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 BLOC1S4Q9NUP1 217 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 SNX12Q9UMY4 172 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 CDK5RAP2Q96SN8 1893 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 PLIN4Q96Q06 1357 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 PJA2O43164 708 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 SRGAP2O75044 1071 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 CAPN2P17655 700 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 RAD51AP2Q09MP3 1159 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 ASPRV1Q53RT3 343 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 PPP1R18Q6NYC8 613 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 POTEDQ86YR6 584 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 PROM2Q8N271 834 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 CCDC155Q8N6L0 562 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 PIGSQ96S52 555 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 TSG101Q99816 390 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
USB1-207ENST00000563149 HPCAL4Q9UM19 191 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 MTMR7Q9Y216 660 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 PCDHA13Q9Y5I0 950 aa14.55□□□□□ -0.08
USB1-207ENST00000563149 MYMKA6NI61 221 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 GNPATO15228 680 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 IL1R1P14778 569 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 TCP1P17987 556 aaKnown RBP14.54□□□□□ -0.08
USB1-207ENST00000563149 ATP2B4P23634 1241 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 TXKP42681 527 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 IRX5P78411 483 aaPredicted RBP14.54□□□□□ -0.08
USB1-207ENST00000563149 SLC20A2Q08357 652 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 USP17L2Q6R6M4 530 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 RAD54LQ92698 747 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 CAPZA3Q96KX2 299 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 PNMA5Q96PV4 448 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 ALS2CR12Q96Q35 445 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 NUCKS1Q9H1E3 243 aaKnown RBP14.54□□□□□ -0.08
USB1-207ENST00000563149 SLC39A2Q9NP94 309 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 JADE2Q9NQC1 790 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 ARHGAP20Q9P2F6 1191 aa14.54□□□□□ -0.08
USB1-207ENST00000563149 BIN2Q9UBW5 565 aaPredicted RBP14.54□□□□□ -0.08
USB1-207ENST00000563149 KDM4FA0A1W2PPD8 638 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 SSU72P8A0A1W2PR75 194 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 ZNF263O14978 683 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 SLC26A4O43511 780 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 SYF2O95926 243 aaKnown RBP14.53□□□□□ -0.08
USB1-207ENST00000563149 TNNT3P45378 269 aaPredicted RBP14.53□□□□□ -0.08
USB1-207ENST00000563149 KIF11P52732 1056 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
USB1-207ENST00000563149 GRIK5Q16478 980 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 CCDC96Q2M329 555 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 KRT79Q5XKE5 535 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 PPP4R3AQ6IN85 833 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 ARHGEF1Q92888 912 aaKnown RBP14.53□□□□□ -0.08
USB1-207ENST00000563149 CEP95Q96GE4 821 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 IFIH1Q9BYX4 1025 aaKnown RBP14.53□□□□□ -0.08
USB1-207ENST00000563149 CD209Q9NNX6 404 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 TFR2Q9UP52 801 aa14.53□□□□□ -0.08
USB1-207ENST00000563149 RNF40O75150 1001 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 ADCY7P51828 1080 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 CYP27A1Q02318 531 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 EHHADHQ08426 723 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 TMEM119Q4V9L6 283 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 C2CD5Q86YS7 1000 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 CREG2Q8IUH2 290 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 RNF10Q8N5U6 811 aaKnown RBP14.52□□□□□ -0.08
USB1-207ENST00000563149 AFAP1L1Q8TED9 768 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 TBC1D22AQ8WUA7 517 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 NAP1L4Q99733 375 aaKnown RBP14.52□□□□□ -0.08
USB1-207ENST00000563149 CRACR2AQ9BSW2 395 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 DEF6Q9H4E7 631 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 TSKSQ9UJT2 592 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 FAM184BQ9ULE4 1060 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 HYOU1Q9Y4L1 999 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 GAKO14976 1311 aa14.52□□□□□ -0.08
USB1-207ENST00000563149 C10orf71Q711Q0 1435 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 MACROD2A1Z1Q3 448 aa14.52□□□□□ -0.09
USB1-207ENST00000563149 PDE2AO00408 941 aaPredicted RBP14.52□□□□□ -0.09
USB1-207ENST00000563149 PRPF6O94906 941 aaKnown RBP14.52□□□□□ -0.09
USB1-207ENST00000563149 PDHBP11177 359 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms