RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 HMX1Q9NP08 348 aaPredicted RBP17.52■□□□□ 0.4
EDC3-206ENST00000563009 PAK6Q9NQU5 681 aaPredicted RBP17.52■□□□□ 0.4
EDC3-206ENST00000563009 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.52■□□□□ 0.4
EDC3-206ENST00000563009 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
EDC3-206ENST00000563009 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 JAK2O60674 1132 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 ADCY7P51828 1080 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 MRPL12P52815 198 aaKnown RBP17.51■□□□□ 0.39
EDC3-206ENST00000563009 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 AIFM3Q96NN9 605 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 IWS1Q96ST2 819 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 MPHOSPH6Q99547 160 aaKnown RBP17.51■□□□□ 0.39
EDC3-206ENST00000563009 UNC93B1Q9H1C4 597 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 ABHD16BQ9H3Z7 469 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 PXMP2Q9NR77 195 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 VPS54Q9P1Q0 977 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
EDC3-206ENST00000563009 B4DLN1 442 aa17.5■□□□□ 0.39
EDC3-206ENST00000563009 DTNBO60941 627 aa17.5■□□□□ 0.39
EDC3-206ENST00000563009 ZNF865P0CJ78 1059 aaPredicted RBP17.5■□□□□ 0.39
EDC3-206ENST00000563009 CCND3P30281 292 aaPredicted RBP17.5■□□□□ 0.39
EDC3-206ENST00000563009 CLK2P49760 499 aaKnown RBP17.5■□□□□ 0.39
EDC3-206ENST00000563009 PRAMEF19Q5SWL8 479 aa17.5■□□□□ 0.39
EDC3-206ENST00000563009 ARHGEF16Q5VV41 709 aa17.5■□□□□ 0.39
EDC3-206ENST00000563009 FCHSD1Q86WN1 690 aa17.5■□□□□ 0.39
EDC3-206ENST00000563009 WASF1Q92558 559 aa17.5■□□□□ 0.39
EDC3-206ENST00000563009 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.5■□□□□ 0.39
EDC3-206ENST00000563009 DDX49Q9Y6V7 483 aaKnown RBP17.5■□□□□ 0.39
EDC3-206ENST00000563009 GNA11P29992 359 aa17.49■□□□□ 0.39
EDC3-206ENST00000563009 ACVR2BQ13705 512 aa17.49■□□□□ 0.39
EDC3-206ENST00000563009 UBE2SQ16763 222 aa17.49■□□□□ 0.39
EDC3-206ENST00000563009 PDCD2LQ9BRP1 358 aa17.49■□□□□ 0.39
EDC3-206ENST00000563009 RNF208Q9H0X6 261 aa17.49■□□□□ 0.39
EDC3-206ENST00000563009 C6orf50Q9HD87 102 aa17.49■□□□□ 0.39
EDC3-206ENST00000563009 SEPT4O43236 478 aa17.48■□□□□ 0.39
EDC3-206ENST00000563009 MYCP01106 439 aaPredicted RBP17.48■□□□□ 0.39
EDC3-206ENST00000563009 GJB1P08034 283 aa17.48■□□□□ 0.39
EDC3-206ENST00000563009 EIF2AK2P19525 551 aaKnown RBP17.48■□□□□ 0.39
EDC3-206ENST00000563009 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
EDC3-206ENST00000563009 PDE4DQ08499 809 aa17.48■□□□□ 0.39
EDC3-206ENST00000563009 PGM5Q15124 567 aa17.48■□□□□ 0.39
EDC3-206ENST00000563009 SNX21Q969T3 373 aa17.48■□□□□ 0.39
EDC3-206ENST00000563009 ALG1Q9BT22 464 aa17.48■□□□□ 0.39
EDC3-206ENST00000563009 VTA1Q9NP79 307 aa17.48■□□□□ 0.39
EDC3-206ENST00000563009 SPDYE3A6NKU9 549 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 ADAMTS3O15072 1205 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 FOSP01100 380 aaPredicted RBP17.47■□□□□ 0.39
EDC3-206ENST00000563009 NR3C2P08235 984 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 XBP1P17861 261 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 NLRP5P59047 1200 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 AP3B2Q13367 1082 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 NPY5RQ15761 445 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 MCTP2Q6DN12 878 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 GALNT17Q6IS24 598 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 VSIG10LQ86VR7 867 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 DAGLBQ8NCG7 672 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 IL31RAQ8NI17 732 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 BICD2Q8TD16 824 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 PHF20Q9BVI0 1012 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 ZHX1Q9UKY1 873 aaPredicted RBP17.47■□□□□ 0.39
EDC3-206ENST00000563009 PCDHA6Q9UN73 950 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 PCDHA8Q9Y5H6 950 aa17.47■□□□□ 0.39
EDC3-206ENST00000563009 MSCO60682 206 aa17.46■□□□□ 0.39
EDC3-206ENST00000563009 CUL4AQ13619 759 aa17.46■□□□□ 0.39
EDC3-206ENST00000563009 STXBP2Q15833 593 aa17.46■□□□□ 0.39
EDC3-206ENST00000563009 LHX8Q68G74 356 aa17.46■□□□□ 0.39
EDC3-206ENST00000563009 TAPT1Q6NXT6 567 aa17.46■□□□□ 0.39
EDC3-206ENST00000563009 FBXO16Q8IX29 292 aaPredicted RBP17.46■□□□□ 0.39
EDC3-206ENST00000563009 REXO1Q8N1G1 1221 aaKnown RBP17.46■□□□□ 0.39
EDC3-206ENST00000563009 TMEM106CQ9BVX2 250 aa17.46■□□□□ 0.39
EDC3-206ENST00000563009 DDX20Q9UHI6 824 aaKnown RBP17.46■□□□□ 0.39
EDC3-206ENST00000563009 PCDHA4Q9UN74 947 aa17.46■□□□□ 0.39
EDC3-206ENST00000563009 FRMPD3Q5JV73 1810 aa17.46■□□□□ 0.39
EDC3-206ENST00000563009 RBM47A0AV96 593 aaKnown RBP17.45■□□□□ 0.38
EDC3-206ENST00000563009 M0R2N6 131 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 EIF3JO75822 258 aaKnown RBP17.45■□□□□ 0.38
EDC3-206ENST00000563009 AKR1A1P14550 325 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 CNGA1P29973 690 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 CCND2P30279 289 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 GJA8P48165 433 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 CCDC144BQ3MJ40 725 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 PCNX4Q63HM2 1172 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 EEPD1Q7L9B9 569 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 CRISPLD2Q9H0B8 497 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 GJB4Q9NTQ9 266 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 TMEM260Q9NX78 707 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 FAM184BQ9ULE4 1060 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 KIAA1217Q5T5P2 1943 aa17.45■□□□□ 0.38
EDC3-206ENST00000563009 CCDC85CA6NKD9 419 aa17.44■□□□□ 0.38
EDC3-206ENST00000563009 K7ELQ4 463 aaPredicted RBP17.44■□□□□ 0.38
EDC3-206ENST00000563009 STAM2O75886 525 aa17.44■□□□□ 0.38
EDC3-206ENST00000563009 SGPL1O95470 568 aa17.44■□□□□ 0.38
EDC3-206ENST00000563009 CAPN2P17655 700 aa17.44■□□□□ 0.38
EDC3-206ENST00000563009 MRPS9P82933 396 aaKnown RBP17.44■□□□□ 0.38
EDC3-206ENST00000563009 IQSEC1Q6DN90 963 aa17.44■□□□□ 0.38
EDC3-206ENST00000563009 BLIDQ8IZY5 108 aa17.44■□□□□ 0.38
EDC3-206ENST00000563009 U2AF1L4Q8WU68 220 aaKnown RBP17.44■□□□□ 0.38
EDC3-206ENST00000563009 ANO3Q9BYT9 981 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms