RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ERICH2A1L162 156 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 BUB1BO60566 1050 aaPredicted RBP15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 MDH1P40925 334 aaKnown RBP15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 LIFRP42702 1097 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 PPARDQ03181 441 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 IFFO1Q0D2I5 559 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 MYO1EQ12965 1108 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 ANKRD20A8PQ5CZ79 823 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 ZC3H12AQ5D1E8 599 aaKnown RBP15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 UBAC1Q9BSL1 405 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 NMT2O60551 498 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 CYP2D6P10635 497 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 GRIK5Q16478 980 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 CAPRIN2Q6IMN6 1127 aaKnown RBP15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 STAMBPL1Q96FJ0 436 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 SLC39A2Q9NP94 309 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 C4BP0C0L5 1744 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 CACNA1SQ13698 1873 aa15.54■□□□□ 0.08
GTF3C1-203ENST00000562609 TNKSO95271 1327 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 SYNRGQ9UMZ2 1314 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 PECAM1P16284 738 aaPredicted RBP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 MATR3P43243 847 aaKnown RBP eCLIP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 TRAF1Q13077 416 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 EMBQ6PCB8 327 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 TRIML1Q8N9V2 468 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 BAIAP2L1Q9UHR4 511 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 A0A1B0GUL6 1792 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 ITIH6Q6UXX5 1313 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 SCTRP47872 440 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 RPS6KA3P51812 740 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 RBM5P52756 815 aaKnown RBP eCLIP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 PRR5LQ6MZQ0 368 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 BZW1Q7L1Q6 419 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 NUCKS1Q9H1E3 243 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 MYH8P13535 1937 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 MGRN1O60291 552 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 CDKL5O76039 1030 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 IDEP14735 1019 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 CDC25CP30307 473 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 DIXDC1Q155Q3 683 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 FAM47AQ5JRC9 791 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 CDKAL1Q5VV42 579 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 KRI1Q8N9T8 703 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 OR8K1Q8NGG5 319 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 ZNF526Q8TF50 670 aaPredicted RBP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 ANKRD2Q9GZV1 360 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 NOD2Q9HC29 1040 aa15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 TRPC5Q9UL62 973 aaPredicted RBP15.53■□□□□ 0.08
GTF3C1-203ENST00000562609 THSD7AQ9UPZ6 1657 aa15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 TNRC6CQ9HCJ0 1690 aaKnown RBP15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 ZNF233A6NK53 670 aa15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 N4BP3O15049 544 aa15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 IPO7O95373 1038 aaKnown RBP15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 ATP6V1G2O95670 118 aa15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 SSRP1Q08945 709 aaKnown RBP15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 RTN1Q16799 776 aa15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 THEMIS2Q5TEJ8 643 aa15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 ZNF654Q8IZM8 581 aa15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 TRPC6Q9Y210 931 aa15.52■□□□□ 0.08
GTF3C1-203ENST00000562609 NHSQ6T4R5 1651 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 BTBD18B2RXH4 712 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 CD44P16070 742 aaKnown RBP15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 HERVK_113P62684 666 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 GRIN1Q05586 938 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 XRCC4Q13426 336 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 CFAP58Q5T655 872 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 ELOA2Q8IYF1 753 aaPredicted RBP15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 MMGT1Q8N4V1 131 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 CERKQ8TCT0 537 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 CCDC43Q96MW1 224 aaKnown RBP15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 RNF41Q9H4P4 317 aaPredicted RBP15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 TAF1LQ8IZX4 1826 aa15.52■□□□□ 0.07
GTF3C1-203ENST00000562609 UTRNP46939 3433 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 COBLO75128 1261 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 ENAHQ8N8S7 591 aaPredicted RBP15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 EHBP1Q8NDI1 1231 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 ESR2Q92731 530 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 SPAG5Q96R06 1193 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 VPS16Q9H269 839 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 HOMER3Q9NSC5 361 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 ZNF831Q5JPB2 1677 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 GYS1P13807 737 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 TRIM29Q14134 588 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 CCDC181Q5TID7 509 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 DZIP1Q86YF9 867 aaKnown RBP15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 FANCBQ8NB91 859 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 NUP58Q9BVL2 599 aa15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 DCP1AQ9NPI6 582 aaPredicted RBP15.51■□□□□ 0.07
GTF3C1-203ENST00000562609 HPDP32754 393 aaPredicted RBP15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 MSL1Q68DK7 614 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 SMYD4Q8IYR2 804 aaPredicted RBP15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 CUL5Q93034 780 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 CAVIN3Q969G5 261 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 YIPF3Q9GZM5 350 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 SBF2Q86WG5 1849 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 RAB27AP51159 221 aa15.5■□□□□ 0.07
GTF3C1-203ENST00000562609 ELF3P78545 371 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms