RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 C16orf86Q6ZW13 317 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 FASTKD5Q7L8L6 764 aaKnown RBP6.91□□□□□ -1.3
CDH13-206ENST00000562601 ZNF589Q86UQ0 364 aaPredicted RBP6.91□□□□□ -1.3
CDH13-206ENST00000562601 GPR161Q8N6U8 529 aaKnown RBP6.91□□□□□ -1.3
CDH13-206ENST00000562601 ZDHHC1Q8WTX9 485 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 SCG3Q8WXD2 468 aaKnown RBP6.91□□□□□ -1.3
CDH13-206ENST00000562601 GTPBP3Q969Y2 492 aaKnown RBP6.91□□□□□ -1.3
CDH13-206ENST00000562601 WDR18Q9BV38 432 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 ARHGAP39Q9C0H5 1083 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 HELLSQ9NRZ9 838 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 ARPP21Q9UBL0 812 aaPredicted RBP6.91□□□□□ -1.3
CDH13-206ENST00000562601 MGAMO43451 1857 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 A0A1W2PRG0 241 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 EML1O00423 815 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 TLR2O60603 784 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 CENPBP07199 599 aaPredicted RBP6.9□□□□□ -1.3
CDH13-206ENST00000562601 BACE1P56817 501 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 ATP2B2Q01814 1243 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 SP3Q02447 781 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 SBK1Q52WX2 424 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 FAM47AQ5JRC9 791 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 GIMAP6Q6P9H5 292 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 CTU1Q7Z7A3 348 aaKnown RBP6.9□□□□□ -1.3
CDH13-206ENST00000562601 CHMP4CQ96CF2 233 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 CCDC136Q96JN2 1154 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 FEZ1Q99689 392 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 CFHR5Q9BXR6 569 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 NACAP1Q9BZK3 213 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 NAPBQ9H115 298 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 MKNK2Q9HBH9 465 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 NEUROD4Q9HD90 331 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 DIAPH3Q9NSV4 1193 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 TMOD4Q9NZQ9 345 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 SWAP70Q9UH65 585 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 AGTPBP1Q9UPW5 1226 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 TACC3Q9Y6A5 838 aa6.9□□□□□ -1.3
CDH13-206ENST00000562601 MYH4Q9Y623 1939 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 A0A1W2PNR3 127 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 FGAP02671 866 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 HSPD1P10809 573 aaKnown RBP6.89□□□□□ -1.31
CDH13-206ENST00000562601 CTGFP29279 349 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 HAND2P61296 217 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 PPARAQ07869 468 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 HIF1AQ16665 826 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 KIAA1755Q5JYT7 1200 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 C17orf99Q6UX52 265 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 TMEM179Q6ZVK1 233 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 CENPQQ7L2Z9 268 aaPredicted RBP6.89□□□□□ -1.31
CDH13-206ENST00000562601 SIAH1Q8IUQ4 282 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 ANKRD13CQ8N6S4 541 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 SMCR8Q8TEV9 937 aaPredicted RBP6.89□□□□□ -1.31
CDH13-206ENST00000562601 ABHD8Q96I13 439 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 CNTNAP3BQ96NU0 1288 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 PARK7Q99497 189 aaKnown RBP6.89□□□□□ -1.31
CDH13-206ENST00000562601 P2RX7Q99572 595 aaKnown RBP6.89□□□□□ -1.31
CDH13-206ENST00000562601 CNTNAP3Q9BZ76 1288 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 ASCC2Q9H1I8 757 aaPredicted RBP6.89□□□□□ -1.31
CDH13-206ENST00000562601 IL25Q9H293 177 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 GINM1Q9NU53 330 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 ATXN7L1Q9ULK2 861 aaPredicted RBP6.89□□□□□ -1.31
CDH13-206ENST00000562601 TRIM17Q9Y577 477 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 CCDC171Q6TFL3 1326 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 ADGRA2Q96PE1 1338 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 DOCK3Q8IZD9 2030 aa6.89□□□□□ -1.31
CDH13-206ENST00000562601 CCDC85CA6NKD9 419 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 C19orf81C9J6K1 198 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 EEF2P13639 858 aaKnown RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 TXLNAP40222 546 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 IRX3P78415 501 aaPredicted RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 LACTBP83111 547 aaPredicted RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 ICA1Q05084 483 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 RRP12Q5JTH9 1297 aaKnown RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 OTOP1Q7RTM1 612 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 ZNF444Q8N0Y2 327 aaPredicted RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 SPICE1Q8N0Z3 855 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 VTI1AQ96AJ9 217 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 ERO1AQ96HE7 468 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 RPAP3Q9H6T3 665 aaPredicted RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 EFCC1Q9HA90 598 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 ZCCHC17Q9NP64 241 aaKnown RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH13-206ENST00000562601 TOMM22Q9NS69 142 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 ZMIZ1Q9ULJ6 1067 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 SLC45A1Q9Y2W3 748 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 PCDHGC4Q9Y5F7 938 aa6.88□□□□□ -1.31
CDH13-206ENST00000562601 GREB1LQ9C091 1923 aaPredicted RBP6.88□□□□□ -1.31
CDH13-206ENST00000562601 ROBO3Q96MS0 1386 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 FAM181BA6NEQ2 426 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 HIP1O00291 1037 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 RANBP6O60518 1105 aaKnown RBP6.87□□□□□ -1.31
CDH13-206ENST00000562601 NMT2O60551 498 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 SLC3A2P08195 630 aaKnown RBP6.87□□□□□ -1.31
CDH13-206ENST00000562601 BCRP11274 1271 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 VCAM1P19320 739 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 CHMLP26374 656 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 PSMC4P43686 418 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 USP14P54578 494 aa6.87□□□□□ -1.31
CDH13-206ENST00000562601 MFAP1P55081 439 aaKnown RBP6.87□□□□□ -1.31
CDH13-206ENST00000562601 TFAP4Q01664 338 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms