RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 C7orf61Q8IZ16 206 aa17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 FBXL16Q8N461 479 aa17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 KLHDC9Q8NEP7 349 aa17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 FERMT2Q96AC1 680 aa17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 RMDN3Q96TC7 470 aa17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 UPF3AQ9H1J1 476 aaKnown RBP17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 RBM28Q9NW13 759 aaKnown RBP17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 CTAGE5O15320 804 aa17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 SEC24BO95487 1268 aa17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 C6orf222P0C671 652 aaPredicted RBP17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 RCAN1P53805 252 aa17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 GJA9P57773 515 aa17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 TOB2Q14106 344 aaPredicted RBP17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 CCSAPQ6IQ19 270 aaPredicted RBP17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 TLK2Q86UE8 772 aa17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 NSUN6Q8TEA1 469 aaKnown RBP17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 TM6SF1Q9BZW5 370 aa17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 PXMP2Q9NR77 195 aa17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 PHF24Q9UPV7 400 aa17.77■□□□□ 0.44
CCNDBP1-203ENST00000562553 NID2Q14112 1375 aa17.77■□□□□ 0.43
CCNDBP1-203ENST00000562553 RBM47A0AV96 593 aaKnown RBP17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 GCOM1H8Y6P7 765 aaPredicted RBP17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 POLR2MP0CAP2 368 aa17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 CST5P28325 142 aaPredicted RBP17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 BMP8BP34820 402 aa17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 METAP2P50579 478 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 ARHGEF16Q5VV41 709 aa17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 IQSEC1Q6DN90 963 aa17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 GPKOWQ92917 476 aaPredicted RBP eCLIP17.76■□□□□ 0.437e-6■□□□□ 10
CCNDBP1-203ENST00000562553 MPHOSPH6Q99547 160 aaKnown RBP17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 MAP3K20Q9NYL2 800 aaKnown RBP17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
CCNDBP1-203ENST00000562553 A0A1W2PQ45 241 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 A0A1W2PQY0 241 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 ADD1P35611 737 aaKnown RBP17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 BEX3Q00994 111 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 KCNA10Q16322 511 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 DUSP28Q4G0W2 176 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 SAMD3Q8N6K7 520 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 IL31RAQ8NI17 732 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 IWS1Q96ST2 819 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 GDF15Q99988 308 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 WDR11Q9BZH6 1224 aa17.75■□□□□ 0.43
CCNDBP1-203ENST00000562553 B4DLN1 442 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 ARIH2O95376 493 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 NR3C2P08235 984 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 MRPL12P52815 198 aaKnown RBP17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 ACLYP53396 1101 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 RTP1P59025 263 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 NKX3-2P78367 333 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 GNASQ5JWF2 1037 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 WWC2Q6AWC2 1192 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 USP17L6PQ6QN14 398 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 SLC39A5Q6ZMH5 540 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 HEATR3Q7Z4Q2 680 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 COPS5Q92905 334 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 PDCD2LQ9BRP1 358 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 LARP6Q9BRS8 491 aaKnown RBP17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 TSEN34Q9BSV6 310 aaKnown RBP17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 SPC25Q9HBM1 224 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 ZMYND8Q9ULU4 1186 aaPredicted RBP17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 MYH7BA7E2Y1 1941 aa17.74■□□□□ 0.43
CCNDBP1-203ENST00000562553 MOXD2PA6NHM9 499 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 MEIS2O14770 477 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 ASGR1P07306 291 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 PDIA3P30101 505 aaKnown RBP17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 EVCP57679 992 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 SNX17Q15036 470 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 PGM5Q15124 567 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 STXBP2Q15833 593 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 C8orf34Q49A92 452 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 TYW1BQ6NUM6 668 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 SEPT14Q6ZU15 432 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 SCFD2Q8WU76 684 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 ZFP91Q96JP5 570 aaPredicted RBP17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 PDRG1Q9NUG6 133 aa17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 V9GY48 417 aaPredicted RBP17.73■□□□□ 0.43
CCNDBP1-203ENST00000562553 FRMPD4Q14CM0 1322 aa17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 MYCLP12524 364 aaPredicted RBP17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 SYN1P17600 705 aa17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 CCT2P78371 535 aaKnown RBP17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 PPP2R5BQ15173 497 aa17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 FSCN1Q16658 493 aaKnown RBP17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 AP5M1Q9H0R1 490 aa17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 NCOA5Q9HCD5 579 aaKnown RBP17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 Q9Y3F1 56 aa17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 LAMA3Q16787 3333 aa17.72■□□□□ 0.43
CCNDBP1-203ENST00000562553 PIK3CDO00329 1044 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 RGS20O76081 388 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 TXNP10599 105 aaKnown RBP17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 ANAPC15P60006 121 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
CCNDBP1-203ENST00000562553 UBE2SQ16763 222 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms