RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 TMEM63BQ5T3F8 832 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 FAM126BQ8IXS8 530 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 TAAR1Q96RJ0 339 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 RMDN3Q96TC7 470 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 COL20A1Q9P218 1284 aa29.54■■■□□ 2.32
MSLN-203ENST00000561896 OPLAHO14841 1288 aa29.53■■■□□ 2.32
MSLN-203ENST00000561896 PPP1R11O60927 126 aaPredicted RBP29.53■■■□□ 2.32
MSLN-203ENST00000561896 SMARCA1P28370 1054 aa29.53■■■□□ 2.32
MSLN-203ENST00000561896 SLC35G1Q2M3R5 365 aa29.53■■■□□ 2.32
MSLN-203ENST00000561896 PNMA6FA0A0J9YX94 578 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 TLR3O15455 904 aaKnown RBP29.52■■■□□ 2.32
MSLN-203ENST00000561896 PRC1O43663 620 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 CYTH3O43739 400 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 PTGS1P23219 599 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 KIF5BP33176 963 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 LIFRP42702 1097 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 TTLL4Q14679 1199 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 BRDTQ58F21 947 aaPredicted RBP29.52■■■□□ 2.32
MSLN-203ENST00000561896 RNF20Q5VTR2 975 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 SKAP1Q86WV1 359 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 CCDC136Q96JN2 1154 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 POLR3EQ9NVU0 708 aa29.52■■■□□ 2.32
MSLN-203ENST00000561896 CFBP00751 764 aa29.51■■■□□ 2.31
MSLN-203ENST00000561896 TIMP1P01033 207 aa29.51■■■□□ 2.31
MSLN-203ENST00000561896 ITGA7Q13683 1181 aa29.51■■■□□ 2.31
MSLN-203ENST00000561896 STXBP2Q15833 593 aa29.51■■■□□ 2.31
MSLN-203ENST00000561896 ZNF654Q8IZM8 581 aa29.51■■■□□ 2.31
MSLN-203ENST00000561896 PIGSQ96S52 555 aa29.51■■■□□ 2.31
MSLN-203ENST00000561896 SH2B2O14492 632 aaPredicted RBP29.5■■■□□ 2.31
MSLN-203ENST00000561896 CDC45O75419 566 aa29.5■■■□□ 2.31
MSLN-203ENST00000561896 CD4P01730 458 aa29.5■■■□□ 2.31
MSLN-203ENST00000561896 TXNP10599 105 aaKnown RBP29.5■■■□□ 2.31
MSLN-203ENST00000561896 ARHGEF16Q5VV41 709 aa29.5■■■□□ 2.31
MSLN-203ENST00000561896 HOMER1Q86YM7 354 aa29.5■■■□□ 2.31
MSLN-203ENST00000561896 OR6J1Q8NGC5 347 aa29.5■■■□□ 2.31
MSLN-203ENST00000561896 CTCFLQ8NI51 663 aaPredicted RBP29.5■■■□□ 2.31
MSLN-203ENST00000561896 LZTS2Q9BRK4 669 aa29.5■■■□□ 2.31
MSLN-203ENST00000561896 A6NJR5 290 aa29.49■■■□□ 2.31
MSLN-203ENST00000561896 KPNA6O60684 536 aa29.49■■■□□ 2.31
MSLN-203ENST00000561896 FPGSQ05932 587 aa29.49■■■□□ 2.31
MSLN-203ENST00000561896 CCDC62Q6P9F0 684 aa29.49■■■□□ 2.31
MSLN-203ENST00000561896 SPZ1Q9BXG8 430 aa29.49■■■□□ 2.31
MSLN-203ENST00000561896 PXMP2Q9NR77 195 aa29.49■■■□□ 2.31
MSLN-203ENST00000561896 SCN10AQ9Y5Y9 1956 aa29.49■■■□□ 2.31
MSLN-203ENST00000561896 GRIN2DO15399 1336 aa29.48■■■□□ 2.31
MSLN-203ENST00000561896 EIF3JO75822 258 aaKnown RBP29.48■■■□□ 2.31
MSLN-203ENST00000561896 GNAQP50148 359 aa29.48■■■□□ 2.31
MSLN-203ENST00000561896 PURAQ00577 322 aaKnown RBP29.48■■■□□ 2.31
MSLN-203ENST00000561896 SHHQ15465 462 aa29.48■■■□□ 2.31
MSLN-203ENST00000561896 NR3C2P08235 984 aa29.47■■■□□ 2.31
MSLN-203ENST00000561896 CALM1P0DP23 149 aa29.47■■■□□ 2.31
MSLN-203ENST00000561896 CALM2P0DP24 149 aa29.47■■■□□ 2.31
MSLN-203ENST00000561896 CALM3P0DP25 149 aa29.47■■■□□ 2.31
MSLN-203ENST00000561896 TSGA10IPQ3SY00 556 aa29.47■■■□□ 2.31
MSLN-203ENST00000561896 MFSD5Q6N075 450 aa29.47■■■□□ 2.31
MSLN-203ENST00000561896 CCDC69A6NI79 296 aa29.46■■■□□ 2.31
MSLN-203ENST00000561896 C9orf50Q5SZB4 431 aa29.46■■■□□ 2.31
MSLN-203ENST00000561896 NFXL1Q6ZNB6 911 aa29.46■■■□□ 2.31
MSLN-203ENST00000561896 MTG1Q9BT17 334 aaPredicted RBP29.46■■■□□ 2.31
MSLN-203ENST00000561896 GPHNQ9NQX3 736 aaPredicted RBP29.46■■■□□ 2.31
MSLN-203ENST00000561896 GCOM1H8Y6P7 765 aaPredicted RBP29.45■■■□□ 2.31
MSLN-203ENST00000561896 ARIH2O95376 493 aa29.45■■■□□ 2.31
MSLN-203ENST00000561896 POLR2MP0CAP2 368 aa29.45■■■□□ 2.31
MSLN-203ENST00000561896 EIF2AK2P19525 551 aaKnown RBP29.45■■■□□ 2.31
MSLN-203ENST00000561896 SGMS1Q86VZ5 419 aa29.45■■■□□ 2.31
MSLN-203ENST00000561896 FAM109BQ6ICB4 259 aaPredicted RBP29.44■■■□□ 2.3
MSLN-203ENST00000561896 SEPT14Q6ZU15 432 aa29.44■■■□□ 2.3
MSLN-203ENST00000561896 RRP36Q96EU6 259 aaKnown RBP29.44■■■□□ 2.3
MSLN-203ENST00000561896 PDCD2LQ9BRP1 358 aa29.44■■■□□ 2.3
MSLN-203ENST00000561896 GH1P01241 217 aa29.43■■■□□ 2.3
MSLN-203ENST00000561896 PSMC6P62333 389 aa29.43■■■□□ 2.3
MSLN-203ENST00000561896 TMEM199Q8N511 208 aa29.43■■■□□ 2.3
MSLN-203ENST00000561896 COPS5Q92905 334 aa29.43■■■□□ 2.3
MSLN-203ENST00000561896 NEK1Q96PY6 1258 aa29.43■■■□□ 2.3
MSLN-203ENST00000561896 MYL10Q9BUA6 226 aa29.43■■■□□ 2.3
MSLN-203ENST00000561896 SLC12A7Q9Y666 1083 aa29.43■■■□□ 2.3
MSLN-203ENST00000561896 MYL3P08590 195 aa29.42■■■□□ 2.3
MSLN-203ENST00000561896 HOXA13P31271 388 aaPredicted RBP29.42■■■□□ 2.3
MSLN-203ENST00000561896 EPHB4P54760 987 aa29.42■■■□□ 2.3
MSLN-203ENST00000561896 PPIGQ13427 754 aaKnown RBP eCLIP29.42■■■□□ 2.3
MSLN-203ENST00000561896 COL9A3Q14050 684 aaPredicted RBP29.42■■■□□ 2.3
MSLN-203ENST00000561896 KRT32Q14532 448 aa29.42■■■□□ 2.3
MSLN-203ENST00000561896 KCNV1Q6PIU1 500 aa29.42■■■□□ 2.3
MSLN-203ENST00000561896 VSIG10LQ86VR7 867 aa29.42■■■□□ 2.3
MSLN-203ENST00000561896 EMID1Q96A84 441 aaPredicted RBP29.42■■■□□ 2.3
MSLN-203ENST00000561896 ALDH8A1Q9H2A2 487 aaPredicted RBP29.42■■■□□ 2.3
MSLN-203ENST00000561896 DDX41Q9UJV9 622 aaKnown RBP29.42■■■□□ 2.3
MSLN-203ENST00000561896 SUPT20HL2P0C7V6 817 aa29.41■■■□□ 2.3
MSLN-203ENST00000561896 NFRKBQ6P4R8 1299 aa29.41■■■□□ 2.3
MSLN-203ENST00000561896 DEFB123Q8N688 67 aa29.41■■■□□ 2.3
MSLN-203ENST00000561896 SEC63Q9UGP8 760 aaKnown RBP29.41■■■□□ 2.3
MSLN-203ENST00000561896 MYH7BA7E2Y1 1941 aa29.4■■■□□ 2.3
MSLN-203ENST00000561896 B4GALT4O60513 344 aa29.4■■■□□ 2.3
MSLN-203ENST00000561896 SMAD3P84022 425 aaKnown RBP29.4■■■□□ 2.3
MSLN-203ENST00000561896 PTPN11Q06124 597 aaPredicted RBP29.4■■■□□ 2.3
MSLN-203ENST00000561896 ARHGAP1Q07960 439 aa29.4■■■□□ 2.3
MSLN-203ENST00000561896 PGM5Q15124 567 aa29.4■■■□□ 2.3
MSLN-203ENST00000561896 LY6KQ17RY6 165 aa29.4■■■□□ 2.3
MSLN-203ENST00000561896 EXOSC10Q01780 885 aaKnown RBP29.39■■■□□ 2.3
MSLN-203ENST00000561896 DHX32Q7L7V1 743 aaKnown RBP29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms