RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 PTPN11Q06124 597 aaPredicted RBP22.39■■□□□ 1.17
CRNDE-210ENST00000560912 PDE4DQ08499 809 aa22.39■■□□□ 1.17
CRNDE-210ENST00000560912 ZNF543Q08ER8 600 aa22.39■■□□□ 1.17
CRNDE-210ENST00000560912 FAM47CQ5HY64 1035 aa22.39■■□□□ 1.17
CRNDE-210ENST00000560912 MICALL1Q8N3F8 863 aa22.39■■□□□ 1.17
CRNDE-210ENST00000560912 TOMM22Q9NS69 142 aa22.39■■□□□ 1.17
CRNDE-210ENST00000560912 MTCH2Q9Y6C9 303 aa22.39■■□□□ 1.17
CRNDE-210ENST00000560912 A0A0D9SFI3 127 aa22.38■■□□□ 1.17
CRNDE-210ENST00000560912 KPNA6O60684 536 aa22.38■■□□□ 1.17
CRNDE-210ENST00000560912 IQCF3P0C7M6 154 aa22.38■■□□□ 1.17
CRNDE-210ENST00000560912 BRDTQ58F21 947 aaPredicted RBP22.38■■□□□ 1.17
CRNDE-210ENST00000560912 RRP12Q5JTH9 1297 aaKnown RBP22.38■■□□□ 1.17
CRNDE-210ENST00000560912 PHOSPHO2Q8TCD6 241 aa22.38■■□□□ 1.17
CRNDE-210ENST00000560912 COPS5Q92905 334 aa22.38■■□□□ 1.17
CRNDE-210ENST00000560912 FAM227BQ96M60 508 aa22.38■■□□□ 1.17
CRNDE-210ENST00000560912 MYH7BA7E2Y1 1941 aa22.37■■□□□ 1.17
CRNDE-210ENST00000560912 EPOPA6NHQ4 379 aa22.37■■□□□ 1.17
CRNDE-210ENST00000560912 ARHGEF15O94989 841 aa22.37■■□□□ 1.17
CRNDE-210ENST00000560912 ARIH2O95376 493 aa22.37■■□□□ 1.17
CRNDE-210ENST00000560912 TFF2Q03403 129 aa22.37■■□□□ 1.17
CRNDE-210ENST00000560912 PPP1R13LQ8WUF5 828 aa22.37■■□□□ 1.17
CRNDE-210ENST00000560912 NECAB3Q96P71 396 aaPredicted RBP22.37■■□□□ 1.17
CRNDE-210ENST00000560912 MPHOSPH6Q99547 160 aaKnown RBP22.37■■□□□ 1.17
CRNDE-210ENST00000560912 RAPGEFL1Q9UHV5 662 aa22.37■■□□□ 1.17
CRNDE-210ENST00000560912 SIP14410 1827 aa22.36■■□□□ 1.17
CRNDE-210ENST00000560912 RFXAPO00287 272 aa22.36■■□□□ 1.17
CRNDE-210ENST00000560912 TTC14Q96N46 770 aa22.36■■□□□ 1.17
CRNDE-210ENST00000560912 TXNP10599 105 aaKnown RBP22.35■■□□□ 1.17
CRNDE-210ENST00000560912 HSPD1P10809 573 aaKnown RBP22.35■■□□□ 1.17
CRNDE-210ENST00000560912 KCNQ1P51787 676 aa22.35■■□□□ 1.17
CRNDE-210ENST00000560912 TAP1Q03518 808 aa22.35■■□□□ 1.17
CRNDE-210ENST00000560912 BFSP2Q13515 415 aa22.35■■□□□ 1.17
CRNDE-210ENST00000560912 AAK1Q2M2I8 961 aa22.35■■□□□ 1.17
CRNDE-210ENST00000560912 MCMDC2Q4G0Z9 681 aa22.35■■□□□ 1.17
CRNDE-210ENST00000560912 ZNF589Q86UQ0 364 aaPredicted RBP22.35■■□□□ 1.17
CRNDE-210ENST00000560912 TICAM2Q86XR7 235 aa22.35■■□□□ 1.17
CRNDE-210ENST00000560912 HERC6Q8IVU3 1022 aa22.35■■□□□ 1.17
CRNDE-210ENST00000560912 CTAGE1Q96RT6 745 aa22.35■■□□□ 1.17
CRNDE-210ENST00000560912 GTPBP6O43824 516 aaPredicted RBP22.34■■□□□ 1.17
CRNDE-210ENST00000560912 BAIAP3O94812 1187 aa22.34■■□□□ 1.17
CRNDE-210ENST00000560912 PCP11498 1178 aaKnown RBP22.34■■□□□ 1.17
CRNDE-210ENST00000560912 PDE1AP54750 535 aa22.34■■□□□ 1.17
CRNDE-210ENST00000560912 CCDC62Q6P9F0 684 aa22.34■■□□□ 1.17
CRNDE-210ENST00000560912 TBC1D10CQ8IV04 446 aa22.34■■□□□ 1.17
CRNDE-210ENST00000560912 RETREG2Q8NC44 543 aa22.34■■□□□ 1.17
CRNDE-210ENST00000560912 RGS22Q8NE09 1264 aa22.34■■□□□ 1.17
CRNDE-210ENST00000560912 CERS4Q9HA82 394 aa22.34■■□□□ 1.17
CRNDE-210ENST00000560912 HAND2P61296 217 aa22.33■■□□□ 1.17
CRNDE-210ENST00000560912 GPATCH4Q5T3I0 446 aaKnown RBP22.33■■□□□ 1.17
CRNDE-210ENST00000560912 SESTD1Q86VW0 696 aa22.33■■□□□ 1.17
CRNDE-210ENST00000560912 CCDC171Q6TFL3 1326 aa22.32■■□□□ 1.16
CRNDE-210ENST00000560912 B4DLN1 442 aa22.32■■□□□ 1.16
CRNDE-210ENST00000560912 MMP3P08254 477 aa22.32■■□□□ 1.16
CRNDE-210ENST00000560912 MRPL12P52815 198 aaKnown RBP22.32■■□□□ 1.16
CRNDE-210ENST00000560912 SKIV2LQ15477 1246 aaKnown RBP22.32■■□□□ 1.16
CRNDE-210ENST00000560912 ANKRD45Q5TZF3 282 aa22.32■■□□□ 1.16
CRNDE-210ENST00000560912 KRT40Q6A162 431 aa22.32■■□□□ 1.16
CRNDE-210ENST00000560912 CAGE1Q8TC20 777 aa22.32■■□□□ 1.16
CRNDE-210ENST00000560912 FTOQ9C0B1 505 aaKnown RBP eCLIP22.32■■□□□ 1.16
CRNDE-210ENST00000560912 MAF1Q9H063 256 aa22.32■■□□□ 1.16
CRNDE-210ENST00000560912 NEDD4P46934 1319 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 MICAL3Q7RTP6 2002 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 ARHGAP1Q07960 439 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 RBL2Q08999 1139 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 NMIQ13287 307 aaPredicted RBP22.31■■□□□ 1.16
CRNDE-210ENST00000560912 PTGISQ16647 500 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 USH1GQ495M9 461 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 MFSD6Q6ZSS7 791 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 AFAP1L1Q8TED9 768 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 ARNTL2Q8WYA1 636 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 COG5Q9UP83 839 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 NOD1Q9Y239 953 aa22.31■■□□□ 1.16
CRNDE-210ENST00000560912 GOLGA8HP0CJ92 632 aa22.3■■□□□ 1.16
CRNDE-210ENST00000560912 GPNMBQ14956 572 aa22.3■■□□□ 1.16
CRNDE-210ENST00000560912 GDF6Q6KF10 455 aaPredicted RBP22.3■■□□□ 1.16
CRNDE-210ENST00000560912 SPRED2Q7Z698 418 aa22.3■■□□□ 1.16
CRNDE-210ENST00000560912 CCDC155Q8N6L0 562 aa22.3■■□□□ 1.16
CRNDE-210ENST00000560912 AFG1LQ8WV93 481 aa22.3■■□□□ 1.16
CRNDE-210ENST00000560912 DHX38Q92620 1227 aaKnown RBP22.3■■□□□ 1.16
CRNDE-210ENST00000560912 KAT2BQ92831 832 aa22.3■■□□□ 1.16
CRNDE-210ENST00000560912 CPVLQ9H3G5 476 aa22.3■■□□□ 1.16
CRNDE-210ENST00000560912 KIF28PB7ZC32 967 aa22.29■■□□□ 1.16
CRNDE-210ENST00000560912 LPXNO60711 386 aa22.29■■□□□ 1.16
CRNDE-210ENST00000560912 GH1P01241 217 aa22.29■■□□□ 1.16
CRNDE-210ENST00000560912 WDR5P61964 334 aaKnown RBP22.29■■□□□ 1.16
CRNDE-210ENST00000560912 GRB10Q13322 594 aa22.29■■□□□ 1.16
CRNDE-210ENST00000560912 CDC37Q16543 378 aaPredicted RBP22.29■■□□□ 1.16
CRNDE-210ENST00000560912 SYTL5Q8TDW5 730 aaPredicted RBP22.29■■□□□ 1.16
CRNDE-210ENST00000560912 COL20A1Q9P218 1284 aa22.29■■□□□ 1.16
CRNDE-210ENST00000560912 ZBTB47Q9UFB7 747 aaPredicted RBP22.29■■□□□ 1.16
CRNDE-210ENST00000560912 ABCB11O95342 1321 aa22.29■■□□□ 1.16
CRNDE-210ENST00000560912 PLA2G5P39877 138 aa22.28■■□□□ 1.16
CRNDE-210ENST00000560912 LY6KQ17RY6 165 aa22.28■■□□□ 1.16
CRNDE-210ENST00000560912 LRRC8DQ7L1W4 858 aa22.28■■□□□ 1.16
CRNDE-210ENST00000560912 DGKHQ86XP1 1220 aa22.28■■□□□ 1.16
CRNDE-210ENST00000560912 TBC1D5Q92609 795 aa22.28■■□□□ 1.16
CRNDE-210ENST00000560912 ESR2Q92731 530 aa22.28■■□□□ 1.16
CRNDE-210ENST00000560912 C1QTNF1Q9BXJ1 281 aa22.28■■□□□ 1.16
CRNDE-210ENST00000560912 UBA5Q9GZZ9 404 aa22.28■■□□□ 1.16
CRNDE-210ENST00000560912 RNF41Q9H4P4 317 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms