RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 SLFN13Q68D06 897 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 CNKSR3Q6P9H4 555 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 BTNL9Q6UXG8 535 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 KIAA1211Q6ZU35 1233 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 DEFB128Q7Z7B8 93 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 RETREG2Q8NC44 543 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 FRAT1Q92837 279 aaPredicted RBP8.87□□□□□ -0.99
APH1B-209ENST00000560716 FBXL18Q96ME1 805 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 SAMD11Q96NU1 681 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 TGS1Q96RS0 853 aaKnown RBP8.87□□□□□ -0.99
APH1B-209ENST00000560716 DNAJC2Q99543 621 aaKnown RBP8.87□□□□□ -0.99
APH1B-209ENST00000560716 CERS4Q9HA82 394 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 MKNK2Q9HBH9 465 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 IL1RAPL2Q9NP60 686 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 PNMA2Q9UL42 364 aa8.87□□□□□ -0.99
APH1B-209ENST00000560716 CTDP1Q9Y5B0 961 aaPredicted RBP8.87□□□□□ -0.99
APH1B-209ENST00000560716 TECTAO75443 2155 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 LCHNA4D1U4 455 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 LINC01553A4QN01 128 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 ICAM1P05362 532 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 IFIT2P09913 472 aaKnown RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 RLBP1P12271 317 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 GNAT2P19087 354 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 PTGS1P23219 599 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 ALDH5A1P51649 535 aaPredicted RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 BRDTQ58F21 947 aaPredicted RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 RCSD1Q6JBY9 416 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 NOL8Q76FK4 1167 aaKnown RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 SPRED2Q7Z698 418 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 FBXO16Q8IX29 292 aaPredicted RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 ZNF444Q8N0Y2 327 aaPredicted RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 LRRC47Q8N1G4 583 aaKnown RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 CCDC155Q8N6L0 562 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 MRPL38Q96DV4 380 aaKnown RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 WDR11Q9BZH6 1224 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 RANBP17Q9H2T7 1088 aaKnown RBP8.86□□□□□ -0.99
APH1B-209ENST00000560716 CTNNA3Q9UI47 895 aa8.86□□□□□ -0.99
APH1B-209ENST00000560716 RAD50Q92878 1312 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 TMEM232C9JQI7 657 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 CHGBP05060 677 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 IL9P15248 144 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 SELPP16109 830 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 KCNJ6P48051 423 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 ZP2Q05996 745 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 PKN1Q16512 942 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 HERC4Q5GLZ8 1057 aaPredicted RBP8.85□□□□□ -0.99
APH1B-209ENST00000560716 MUM1L1Q5H9M0 696 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 PTCRAQ6ISU1 281 aaPredicted RBP8.85□□□□□ -0.99
APH1B-209ENST00000560716 TRAF7Q6Q0C0 670 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 RGS22Q8NE09 1264 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 DNERQ8NFT8 737 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 PABPC5Q96DU9 382 aaKnown RBP8.85□□□□□ -0.99
APH1B-209ENST00000560716 PRRX2Q99811 253 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 BOLA2Q9H3K6 86 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 EPB41L4AQ9HCS5 686 aaPredicted RBP8.85□□□□□ -0.99
APH1B-209ENST00000560716 PRR12Q9ULL5 1215 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 FAM50BQ9Y247 325 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 MYH6P13533 1939 aa8.85□□□□□ -0.99
APH1B-209ENST00000560716 NCK2O43639 380 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 RAD21O60216 631 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 NBNO60934 754 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 ALAS1P13196 640 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 FXR2P51116 673 aaKnown RBP eCLIP8.84□□□□□ -0.99
APH1B-209ENST00000560716 PLXNA3P51805 1871 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 DEFB103AP81534 67 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 FOXK2Q01167 660 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 CTC1Q2NKJ3 1217 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 TIGD5Q53EQ6 642 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 CCDC62Q6P9F0 684 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 LRRC8DQ7L1W4 858 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 ADHFE1Q8IWW8 467 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 SIRT2Q8IXJ6 389 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 KBTBD3Q8NAB2 608 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 OR6J1Q8NGC5 347 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 GDPD5Q8WTR4 605 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 SCFD2Q8WU76 684 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 APPBP2Q92624 585 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 EMID1Q96A84 441 aaPredicted RBP8.84□□□□□ -0.99
APH1B-209ENST00000560716 MFSD14AQ96MC6 490 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 UPF3BQ9BZI7 483 aaKnown RBP8.84□□□□□ -0.99
APH1B-209ENST00000560716 FTOQ9C0B1 505 aaKnown RBP eCLIP8.84□□□□□ -0.99
APH1B-209ENST00000560716 GPHNQ9NQX3 736 aaPredicted RBP8.84□□□□□ -0.99
APH1B-209ENST00000560716 HOMER2Q9NSB8 354 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 INSL6Q9Y581 213 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 C5orf42Q9H799 3197 aa8.84□□□□□ -0.99
APH1B-209ENST00000560716 WDR19Q8NEZ3 1342 aa8.83□□□□□ -1
APH1B-209ENST00000560716 PATL2C9JE40 543 aaKnown RBP8.83□□□□□ -1
APH1B-209ENST00000560716 H3BNC9 293 aa8.83□□□□□ -1
APH1B-209ENST00000560716 HAS3O00219 553 aa8.83□□□□□ -1
APH1B-209ENST00000560716 ST18O60284 1047 aa8.83□□□□□ -1
APH1B-209ENST00000560716 HMMRO75330 724 aa8.83□□□□□ -1
APH1B-209ENST00000560716 ZFYP08048 801 aaPredicted RBP8.83□□□□□ -1
APH1B-209ENST00000560716 MYL3P08590 195 aa8.83□□□□□ -1
APH1B-209ENST00000560716 FGRP09769 529 aa8.83□□□□□ -1
APH1B-209ENST00000560716 CKBP12277 381 aa8.83□□□□□ -1
APH1B-209ENST00000560716 HOXD8P13378 290 aaPredicted RBP8.83□□□□□ -1
APH1B-209ENST00000560716 KCNA5P22460 613 aa8.83□□□□□ -1
APH1B-209ENST00000560716 SLC1A4P43007 532 aa8.83□□□□□ -1
APH1B-209ENST00000560716 PDE4BQ07343 736 aa8.83□□□□□ -1
APH1B-209ENST00000560716 CSPP1Q1MSJ5 1256 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms