RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 TRAPPC10P48553 1259 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 RPS6P62753 249 aaKnown RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 ARHGAP4P98171 946 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 MDM2Q00987 491 aaPredicted RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 BAATQ14032 418 aaPredicted RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 KARSQ15046 597 aaKnown RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 PRR16Q569H4 304 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 SNRNP48Q6IEG0 339 aaKnown RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 LRSAM1Q6UWE0 723 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 NSMFQ6X4W1 530 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 ARMC9Q7Z3E5 817 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 ZNF713Q8N859 430 aaPredicted RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 MMTAG2Q9BU76 263 aaKnown RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 ASCC2Q9H1I8 757 aaPredicted RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 TNMDQ9H2S6 317 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 GBA2Q9HCG7 927 aaPredicted RBP8.45□□□□□ -1.06
IDH3A-220ENST00000560667 RBPJLQ9UBG7 517 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 TELO2Q9Y4R8 837 aa8.45□□□□□ -1.06
IDH3A-220ENST00000560667 PAPPA2Q9BXP8 1791 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 COL11A1P12107 1806 aaPredicted RBP8.44□□□□□ -1.06
IDH3A-220ENST00000560667 GCOM1H8Y6P7 765 aaPredicted RBP8.44□□□□□ -1.06
IDH3A-220ENST00000560667 RBAK-RBAKDNI3L0D1 243 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 ZBED4O75132 1171 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 CNMDO75829 334 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 POLR2MP0CAP2 368 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 ARP10275 920 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 PPP1R18Q6NYC8 613 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 CCDC73Q6ZRK6 1079 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 SYTL5Q8TDW5 730 aaPredicted RBP8.44□□□□□ -1.06
IDH3A-220ENST00000560667 DHX58Q96C10 678 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 SDF4Q9BRK5 362 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 PAGR1Q9BTK6 254 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 DDX25Q9UHL0 483 aaKnown RBP8.44□□□□□ -1.06
IDH3A-220ENST00000560667 KCNH4Q9UQ05 1017 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 FAM237AA0A1B0GTK4 181 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 PIK3CDO00329 1044 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 NEMFO60524 1076 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 BMP6P22004 513 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 AFMP43652 599 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 MRPS9P82933 396 aaKnown RBP8.44□□□□□ -1.06
IDH3A-220ENST00000560667 CNTN2Q02246 1040 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 DTHD1Q6ZMT9 781 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 FAM43AQ8N2R8 423 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 BRI3BPQ8WY22 251 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 TTC12Q9H892 705 aaPredicted RBP8.44□□□□□ -1.06
IDH3A-220ENST00000560667 HOXC10Q9NYD6 342 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 PKD2L1Q9P0L9 805 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 MRPL11Q9Y3B7 192 aaKnown RBP8.44□□□□□ -1.06
IDH3A-220ENST00000560667 ASTN1O14525 1302 aa8.44□□□□□ -1.06
IDH3A-220ENST00000560667 PTPRFP10586 1907 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 IGLV3-22A0A075B6J6 115 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 SPDYE3A6NKU9 549 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 BTBD19C9JJ37 291 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 CXCL11O14625 94 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 MSH4O15457 936 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 ACTN4O43707 911 aaKnown RBP8.43□□□□□ -1.06
IDH3A-220ENST00000560667 OR52Z1P0C646 297 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 ITGB5P18084 799 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 EIF2AK2P19525 551 aaKnown RBP8.43□□□□□ -1.06
IDH3A-220ENST00000560667 HOXA7P31268 230 aaPredicted RBP8.43□□□□□ -1.06
IDH3A-220ENST00000560667 HSD17B4P51659 736 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 PPIL2Q13356 520 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 CALCRLQ16602 461 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 NAALADL2Q58DX5 795 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 PPP4R3AQ6IN85 833 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 LBX2Q6XYB7 198 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 KRBA2Q6ZNG9 492 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 KCNK18Q7Z418 384 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
IDH3A-220ENST00000560667 WDR11Q9BZH6 1224 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 BLZF1Q9H2G9 400 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 POLD4Q9HCU8 107 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 RNF146Q9NTX7 359 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 CEP131Q9UPN4 1083 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 PARP14Q460N5 1801 aa8.43□□□□□ -1.06
IDH3A-220ENST00000560667 ZBTB39O15060 712 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 AP5Z1O43299 807 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 SORBS3O60504 671 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 KINO60870 393 aaKnown RBP8.42□□□□□ -1.06
IDH3A-220ENST00000560667 ATP9AO75110 1047 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 PTGS1P23219 599 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 SREBF1P36956 1147 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 HUNKP57058 714 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 HERVK_113P62684 666 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 E2F4Q16254 413 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 RBM43Q6ZSC3 357 aaKnown RBP8.42□□□□□ -1.06
IDH3A-220ENST00000560667 FERMT2Q96AC1 680 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 PCDHA5Q9Y5H7 936 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 ABCB11O95342 1321 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 CYP3A7-CYP3A51PA0A087WV96 503 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 EML1O00423 815 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 COBLO75128 1261 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 PGK2P07205 417 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 MYCLP12524 364 aaPredicted RBP8.42□□□□□ -1.06
IDH3A-220ENST00000560667 CYP3A7P24462 503 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 USP11P51784 963 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 TYRO3Q06418 890 aa8.42□□□□□ -1.06
IDH3A-220ENST00000560667 DHX8Q14562 1220 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms