RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 A6NJR5 290 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 H3BQ06 376 aaPredicted RBP10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 NBNO60934 754 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 CXCL10P02778 98 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 SLC1A4P43007 532 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 BAATQ14032 418 aaPredicted RBP10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 RCSD1Q6JBY9 416 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 ZSCAN25Q6NSZ9 544 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 CNKSR3Q6P9H4 555 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 RASGRP2Q7LDG7 609 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 AFAP1L1Q8TED9 768 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 GMCL1Q96IK5 515 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 EPB41L4AQ9HCS5 686 aaPredicted RBP10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 ADD3Q9UEY8 706 aaKnown RBP10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 PRR12Q9ULL5 1215 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 ISY1Q9ULR0 285 aaKnown RBP10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 MYO10Q9HD67 2058 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 PLIN4Q96Q06 1357 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 PLXNA3P51805 1871 aa10.64□□□□□ -0.71
RABGGTA-217ENST00000560521 KIAA1671Q9BY89 1806 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 KPNA6O60684 536 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 TSPY3P0CV98 308 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 TSPY8P0CW00 308 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 SELPP16109 830 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 ZP2Q05996 745 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 IKQ13123 557 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 BRDTQ58F21 947 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 GDF6Q6KF10 455 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 FAM117BQ6P1L5 589 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 SIRT2Q8IXJ6 389 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 DHX38Q92620 1227 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 OSBP2Q969R2 916 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 C17orf80Q9BSJ5 609 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 CCPG1Q9ULG6 757 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 NOD1Q9Y239 953 aa10.63□□□□□ -0.71
RABGGTA-217ENST00000560521 LOC102724159A0A0B4J2E5 919 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 ABHD14A-ACY1A0A1B0GW23 586 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 NFIBO00712 420 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 NKRFO15226 690 aaKnown RBP eCLIP10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 ICAM1P05362 532 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 CHMP4BP1P59074 171 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 TFAP4Q01664 338 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 PWP2Q15269 919 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 LRRC8DQ7L1W4 858 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 FBXO22Q8NEZ5 403 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 MRPL38Q96DV4 380 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 PRKAG3Q9UGI9 489 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 COL4A6Q14031 1691 aa10.62□□□□□ -0.71
RABGGTA-217ENST00000560521 CFAP54Q96N23 3096 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 PTPDC1A2A3K4 754 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 RAB11FIP3O75154 756 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 ARIH2O95376 493 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 PARNO95453 639 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 CKBP12277 381 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 IRS1P35568 1242 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 RBL2Q08999 1139 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 IKBKEQ14164 716 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 PPP2R5BQ15173 497 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 TRAF7Q6Q0C0 670 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 SESTD1Q86VW0 696 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 IFNL3Q8IZI9 196 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 PRSS33Q8NF86 280 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 PANK1Q8TE04 598 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 KAT2BQ92831 832 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 PABPC5Q96DU9 382 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 RANBP17Q9H2T7 1088 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 IL17RBQ9NRM6 502 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 INSL6Q9Y581 213 aa10.61□□□□□ -0.71
RABGGTA-217ENST00000560521 RAD50Q92878 1312 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 PATL2C9JE40 543 aaKnown RBP10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 M0R2C6 588 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 GPAA1O43292 621 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 APPP05067 770 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 TXNP10599 105 aaKnown RBP10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 EDNRBP24530 442 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 CALML3P27482 149 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 LTBRP36941 435 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 TDO2P48775 406 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 HTRA4P83105 476 aaPredicted RBP10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 PDE4DQ08499 809 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 MBTPS1Q14703 1052 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 COL19A1Q14993 1142 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 EPC2Q52LR7 807 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 TCEAL5Q5H9L2 206 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 TTBK2Q6IQ55 1244 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 SLC30A10Q6XR72 485 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 ADHFE1Q8IWW8 467 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 BANK1Q8NDB2 785 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 SCFD2Q8WU76 684 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 CLEC4DQ8WXI8 215 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 APPBP2Q92624 585 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 MFSD14AQ96MC6 490 aa10.6□□□□□ -0.71
RABGGTA-217ENST00000560521 CRBNQ96SW2 442 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms