RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 SMCO2A6NFE2 343 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 B4DLN1 442 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 ADCY6O43306 1168 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 PRPF3O43395 683 aaKnown RBP9.85□□□□□ -0.83
USP3-217ENST00000560070 MSCO60682 206 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 NR3C2P08235 984 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 SMPD1P17405 629 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 MRPL12P52815 198 aaKnown RBP9.85□□□□□ -0.83
USP3-217ENST00000560070 BEX3Q00994 111 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 SCRN1Q12765 414 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 ANKRD1Q15327 319 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 LRRC41Q15345 812 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 STXBP2Q15833 593 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 LY6KQ17RY6 165 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 IQSEC1Q6DN90 963 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 NECAB2Q7Z6G3 386 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 DNERQ8NFT8 737 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 COPS5Q92905 334 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 PGBD1Q96JS3 809 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 MPHOSPH6Q99547 160 aaKnown RBP9.85□□□□□ -0.83
USP3-217ENST00000560070 WDR11Q9BZH6 1224 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 KATNBL1Q9H079 304 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 AP5M1Q9H0R1 490 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 C11orf49Q9H6J7 331 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 PXMP2Q9NR77 195 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 TMEM260Q9NX78 707 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 NRBP1Q9UHY1 535 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 PTPRFP10586 1907 aa9.85□□□□□ -0.83
USP3-217ENST00000560070 MYADML2A6NDP7 307 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 KBTBD13C9JR72 458 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 STXBP3O00186 592 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 MEIS2O14770 477 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 ADAMTS3O15072 1205 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 LARGE1O95461 756 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 C6orf222P0C671 652 aaPredicted RBP9.84□□□□□ -0.83
USP3-217ENST00000560070 TXNP10599 105 aaKnown RBP9.84□□□□□ -0.83
USP3-217ENST00000560070 SCG2P13521 617 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 IFNAR1P17181 557 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
USP3-217ENST00000560070 FOSBP53539 338 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 EVCP57679 992 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 PPP2R5BQ15173 497 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 NTRK3Q16288 839 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 KCNA10Q16322 511 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 PKN1Q16512 942 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 ME3Q16798 604 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 PFKFB3Q16875 520 aaPredicted RBP9.84□□□□□ -0.83
USP3-217ENST00000560070 TYW1BQ6NUM6 668 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 CPLX2Q6PUV4 134 aaKnown RBP9.84□□□□□ -0.83
USP3-217ENST00000560070 RNF180Q86T96 592 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 IL31RAQ8NI17 732 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 MORC4Q8TE76 937 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 PDCD2LQ9BRP1 358 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 ALDH8A1Q9H2A2 487 aaPredicted RBP9.84□□□□□ -0.83
USP3-217ENST00000560070 SPC25Q9HBM1 224 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 VTA1Q9NP79 307 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 VPS54Q9P1Q0 977 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 PCDH10Q9P2E7 1040 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 PCDHA6Q9UN73 950 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 PCDHA8Q9Y5H6 950 aa9.84□□□□□ -0.83
USP3-217ENST00000560070 PFKFB2O60825 505 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 DUSP11O75319 330 aaKnown RBP9.83□□□□□ -0.84
USP3-217ENST00000560070 EIF3JO75822 258 aaKnown RBP9.83□□□□□ -0.84
USP3-217ENST00000560070 EDNRBP24530 442 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 CCND2P30279 289 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 ADCY7P51828 1080 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 RCAN1P53805 252 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 NLRP5P59047 1200 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 CHMP4BP1P59074 171 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 PGM5Q15124 567 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 GNASQ5JWF2 1037 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 JAKMIP3Q5VZ66 844 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 ANKLE1Q8NAG6 615 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 AIFM3Q96NN9 605 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 IWS1Q96ST2 819 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 KIF2CQ99661 725 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 BARHL2Q9NY43 387 aa9.83□□□□□ -0.84
USP3-217ENST00000560070 MAP3K20Q9NYL2 800 aaKnown RBP9.83□□□□□ -0.84
USP3-217ENST00000560070 SPDYE3A6NKU9 549 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 ARIH2O95376 493 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 RBM25P49756 843 aaKnown RBP9.82□□□□□ -0.84
USP3-217ENST00000560070 UBE2Q1Q7Z7E8 422 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 TLK2Q86UE8 772 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 VSIG10LQ86VR7 867 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 TRIM22Q8IYM9 498 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 SAMD3Q8N6K7 520 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 OR6J1Q8NGC5 347 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 PPP1R13LQ8WUF5 828 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 UIMC1Q96RL1 719 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 HTATIP2Q9BUP3 242 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 BACH2Q9BYV9 841 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 BCAS3Q9H6U6 928 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 RIC8AQ9NPQ8 531 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 LIMCH1Q9UPQ0 1083 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 GNEQ9Y223 722 aaKnown RBP9.82□□□□□ -0.84
USP3-217ENST00000560070 RLFQ13129 1914 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 SYNRGQ9UMZ2 1314 aa9.82□□□□□ -0.84
USP3-217ENST00000560070 RBM47A0AV96 593 aaKnown RBP9.81□□□□□ -0.84
USP3-217ENST00000560070 DNM1LO00429 736 aa9.81□□□□□ -0.84
USP3-217ENST00000560070 EVI5O60447 810 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms