RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FBXO40Q9UH90 709 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 SRPRBQ9Y5M8 271 aaKnown RBP13.85□□□□□ -0.19
HERC1-205ENST00000559886 CYP3A7-CYP3A51PA0A087WV96 503 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 LAD1O00515 517 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 NEMFO60524 1076 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 CUTAO60888 179 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 TDP2O95551 362 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 SLC25A27O95847 323 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 CYP3A4P08684 503 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 CYP3A7P24462 503 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 COPB2P35606 906 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 GCLCP48506 637 aaPredicted RBP13.85□□□□□ -0.19
HERC1-205ENST00000559886 Q3C1V9 767 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 ARL6IP4Q66PJ3 421 aaKnown RBP13.85□□□□□ -0.19
HERC1-205ENST00000559886 SLC30A10Q6XR72 485 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 FERMT2Q96AC1 680 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 PARK7Q99497 189 aaKnown RBP13.85□□□□□ -0.19
HERC1-205ENST00000559886 ZNFX1Q9P2E3 1918 aaKnown RBP13.85□□□□□ -0.19
HERC1-205ENST00000559886 RPTORQ8N122 1335 aa13.85□□□□□ -0.19
HERC1-205ENST00000559886 ERVK-9P63128 1117 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 ERVK-24P63145 666 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 BAATQ14032 418 aaPredicted RBP13.84□□□□□ -0.19
HERC1-205ENST00000559886 TPRNQ4KMQ1 711 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 MBOAT7Q96N66 472 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 TMEM60Q9H2L4 133 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 A1CFQ9NQ94 594 aaKnown RBP13.84□□□□□ -0.19
HERC1-205ENST00000559886 CYP39A1Q9NYL5 469 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 IGF2BP3O00425 579 aaKnown RBP eCLIP13.84□□□□□ -0.19
HERC1-205ENST00000559886 CIITAP33076 1130 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.84□□□□□ -0.19
HERC1-205ENST00000559886 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
HERC1-205ENST00000559886 CLIC6Q96NY7 704 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 FRMPD4Q14CM0 1322 aa13.84□□□□□ -0.19
HERC1-205ENST00000559886 SLC37A4O43826 429 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 ERCC3P19447 782 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 CMA1P23946 247 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 PRPHP41219 470 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 DDX25Q9UHL0 483 aaKnown RBP13.83□□□□□ -0.2
HERC1-205ENST00000559886 GRIN1Q05586 938 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
HERC1-205ENST00000559886 SHCBP1Q8NEM2 672 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 GPRC5AQ8NFJ5 357 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 MTMR9Q96QG7 549 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 TAAR1Q96RJ0 339 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 PFASO15067 1338 aa13.83□□□□□ -0.2
HERC1-205ENST00000559886 OR52Z1P0C646 297 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 LIG1P18858 919 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 APLP1P51693 650 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 IL17AQ16552 155 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 SHC4Q6S5L8 630 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 MRPS27Q92552 414 aaKnown RBP13.82□□□□□ -0.2
HERC1-205ENST00000559886 MROH8Q9H579 483 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 FAM86B1E9PN63 330 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 FAM86B2P0C5J1 330 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 CALCRLQ16602 461 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 Q4G0T1 1027 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 RESP18Q5W5W9 173 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 ANKRD35Q8N283 1001 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 ANKRD13CQ8N6S4 541 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 FSIP1Q8NA03 581 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 RMDN3Q96TC7 470 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 R3HDMLQ9H3Y0 253 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 GOLPH3LQ9H4A5 285 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 PXMP2Q9NR77 195 aa13.82□□□□□ -0.2
HERC1-205ENST00000559886 VWA3AA6NCI4 1184 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 RASSF10A6NK89 507 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 TM4SF4P48230 202 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 UBXN2AP68543 259 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 CCNA1P78396 465 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 CYP4F22Q6NT55 531 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 DTHD1Q6ZMT9 781 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 LENG9Q96B70 501 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 PURBQ96QR8 312 aaKnown RBP13.81□□□□□ -0.2
HERC1-205ENST00000559886 FAM237AA0A1B0GTK4 181 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 ZNF76P36508 570 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 PCNX4Q63HM2 1172 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 PORCNQ9H237 461 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 KCNMB3Q9NPA1 279 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 ADGRA2Q96PE1 1338 aa13.81□□□□□ -0.2
HERC1-205ENST00000559886 PLXNB2O15031 1838 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 IGLV3-22A0A075B6J6 115 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 A0A1B0GVL5 298 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 LONP1P36776 959 aaKnown RBP13.8□□□□□ -0.2
HERC1-205ENST00000559886 PGM5Q15124 567 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 FAM110CQ1W6H9 321 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 DEFB115Q30KQ5 88 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 PRR16Q569H4 304 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 CCDC73Q6ZRK6 1079 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
HERC1-205ENST00000559886 ENGASEQ8NFI3 743 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 IL31RAQ8NI17 732 aa13.8□□□□□ -0.2
HERC1-205ENST00000559886 NSUN6Q8TEA1 469 aaKnown RBP13.8□□□□□ -0.2
HERC1-205ENST00000559886 HAS1Q92839 578 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms