RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 SNRPB2P08579 225 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 ECI1P42126 302 aa6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 AFF3P51826 1226 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 NCKAP1LP55160 1127 aa6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 GFRA1P56159 465 aa6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 PPP2R2AP63151 447 aa6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 ZC3H14Q6PJT7 736 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 C1orf159Q96HA4 380 aa6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 ZCCHC4Q9H5U6 513 aa6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 EPB41L4AQ9HCS5 686 aaPredicted RBP6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 RAPGEFL1Q9UHV5 662 aa6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 PCDHA5Q9Y5H7 936 aa6.54□□□□□ -1.36
CTDSPL2-207ENST00000559738 TRIM13O60858 407 aa6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 FBLN1P23142 703 aa6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 PRR5P85299 388 aa6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 ZNF200P98182 395 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 TMEFF1Q8IYR6 380 aa6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 TMEM145Q8NBT3 493 aa6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 PLEKHO2Q8TD55 490 aa6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 DACT3Q96B18 629 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 PARD6AQ9NPB6 346 aa6.53□□□□□ -1.36
CTDSPL2-207ENST00000559738 IRS2Q9Y4H2 1338 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 BUB1BO60566 1050 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 FUCA1P04066 466 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 ATP2B1P20020 1258 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 HOXA5P20719 270 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 KCNJ6P48051 423 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 CTSWP56202 376 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 TESK1Q15569 626 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 CNKSR3Q6P9H4 555 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 FAM129CQ86XR2 697 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 CKAP2LQ8IYA6 745 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 CCDC140Q96MF4 163 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 TRIM55Q9BYV6 548 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.52□□□□□ -1.372e-6■□□□□ 9.2
CTDSPL2-207ENST00000559738 MARCH2Q9P0N8 246 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 MSRB2Q9Y3D2 182 aa6.52□□□□□ -1.37
CTDSPL2-207ENST00000559738 CPP00450 1065 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 VMACQ2NL98 169 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 SLC35F1Q5T1Q4 408 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 ACBD5Q5T8D3 534 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 E4F1Q66K89 784 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 IQCEQ6IPM2 695 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 TEX2Q8IWB9 1127 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 NETO2Q8NC67 525 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 RCBTB1Q8NDN9 531 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 DIO2Q92813 273 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 KCNC2Q96PR1 638 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 BCAS3Q9H6U6 928 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 FBXL7Q9UJT9 491 aa6.51□□□□□ -1.37
CTDSPL2-207ENST00000559738 AGRPO00253 132 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 MEFVO15553 781 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 NTRK1P04629 796 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 LCP1P13796 627 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 IGFBP6P24592 240 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 GTF2F1P35269 517 aaKnown RBP eCLIP6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 WWC2Q6AWC2 1192 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 CABP7Q86V35 215 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 NLRP10Q86W26 655 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 PPIL6Q8IXY8 311 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 MARCH10Q8NA82 808 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 ST13P5Q8NFI4 369 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 USP33Q8TEY7 942 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 PWWP2AQ96N64 755 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 IER2Q9BTL4 223 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 ARHGEF4Q9NR80 690 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 BTG4Q9NY30 223 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 DBR1Q9UK59 544 aaKnown RBP6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 SIT1Q9Y3P8 196 aa6.5□□□□□ -1.37
CTDSPL2-207ENST00000559738 DLX3O60479 287 aa6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 ATF2P15336 505 aa6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 FPR2P25090 351 aa6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 LIMS1P48059 325 aa6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 KCNAB2Q13303 367 aa6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 SGSM3Q96HU1 749 aa6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 TIMM13Q9Y5L4 95 aaPredicted RBP6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 NPFFR2Q9Y5X5 522 aa6.49□□□□□ -1.37
CTDSPL2-207ENST00000559738 A0A0G2JLL6 359 aaPredicted RBP6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 C22orf46C9J442 243 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 ASGR2P07307 311 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 PFKLP17858 780 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 LTBRP36941 435 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 BCL6P41182 706 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 MC3RP41968 323 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 RPL11P62913 178 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 MAP4K2Q12851 820 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 HSP90AA2PQ14568 343 aaPredicted RBP6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 YOD1Q5VVQ6 348 aaPredicted RBP6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 SPATC1Q76KD6 591 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 Q8N1Y9 231 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 TSPAN17Q96FV3 270 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 PPP1R1BQ9UD71 204 aaPredicted RBP6.48□□□□□ -1.37
CTDSPL2-207ENST00000559738 PMLP29590 882 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 RBL2Q08999 1139 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 SERINC3Q13530 473 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 NBPF6Q5VWK0 638 aa6.47□□□□□ -1.37
CTDSPL2-207ENST00000559738 CEP68Q76N32 757 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms