RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 POLR3EQ9NVU0 708 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 COL20A1Q9P218 1284 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 PCDHA11Q9Y5I1 949 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 SLC4A7Q9Y6M7 1214 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 RFXAPO00287 272 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 IQCF3P0C7M6 154 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 BMP1P13497 986 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 CALML3P27482 149 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 RRP1P56182 461 aaKnown RBP13.05□□□□□ -0.32
HERC1-204ENST00000559715 RRP12Q5JTH9 1297 aaKnown RBP13.05□□□□□ -0.32
HERC1-204ENST00000559715 NFRKBQ6P4R8 1299 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 SPRED2Q7Z698 418 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 RPUSD2Q8IZ73 545 aaKnown RBP13.05□□□□□ -0.32
HERC1-204ENST00000559715 RGS22Q8NE09 1264 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 DNERQ8NFT8 737 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 ANKS1AQ92625 1134 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 CRBNQ96SW2 442 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 THEGQ9P2T0 379 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 NEDD4P46934 1319 aa13.05□□□□□ -0.32
HERC1-204ENST00000559715 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
HERC1-204ENST00000559715 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 MYL3P08590 195 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 ATP2A2P16615 1042 aaKnown RBP13.04□□□□□ -0.32
HERC1-204ENST00000559715 CPT1AP50416 773 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 TCTN1Q2MV58 587 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 OR6J1Q8NGC5 347 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 KAT2BQ92831 832 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 MTCH2Q9Y6C9 303 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 WDFY4Q6ZS81 3184 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
HERC1-204ENST00000559715 COL4A4P53420 1690 aaPredicted RBP13.03□□□□□ -0.32
HERC1-204ENST00000559715 OPLAHO14841 1288 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 NKRFO15226 690 aaKnown RBP eCLIP13.03□□□□□ -0.32
HERC1-204ENST00000559715 LPXNO60711 386 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 CA3P07451 260 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 PFKMP08237 780 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 IGFBP4P22692 258 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 MRPS5P82675 430 aaKnown RBP13.03□□□□□ -0.32
HERC1-204ENST00000559715 TFF2Q03403 129 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 TAP1Q03518 808 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 ARHGAP1Q07960 439 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 KRT40Q6A162 431 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 DEFB128Q7Z7B8 93 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 DHX38Q92620 1227 aaKnown RBP13.03□□□□□ -0.32
HERC1-204ENST00000559715 TAAR1Q96RJ0 339 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 MTIF3Q9H2K0 278 aaKnown RBP13.03□□□□□ -0.32
HERC1-204ENST00000559715 RAPGEFL1Q9UHV5 662 aa13.03□□□□□ -0.32
HERC1-204ENST00000559715 TXNP10599 105 aaKnown RBP13.02□□□□□ -0.33
HERC1-204ENST00000559715 PCP11498 1178 aaKnown RBP13.02□□□□□ -0.33
HERC1-204ENST00000559715 PTPN11Q06124 597 aaPredicted RBP13.02□□□□□ -0.33
HERC1-204ENST00000559715 PDE4DQ08499 809 aa13.02□□□□□ -0.33
HERC1-204ENST00000559715 PPP2R5BQ15173 497 aa13.02□□□□□ -0.33
HERC1-204ENST00000559715 MFSD6Q6ZSS7 791 aa13.02□□□□□ -0.33
HERC1-204ENST00000559715 SESTD1Q86VW0 696 aa13.02□□□□□ -0.33
HERC1-204ENST00000559715 DGKHQ86XP1 1220 aa13.02□□□□□ -0.33
HERC1-204ENST00000559715 SYTL5Q8TDW5 730 aaPredicted RBP13.02□□□□□ -0.33
HERC1-204ENST00000559715 NECAB3Q96P71 396 aaPredicted RBP13.02□□□□□ -0.33
HERC1-204ENST00000559715 TOMM22Q9NS69 142 aa13.02□□□□□ -0.33
HERC1-204ENST00000559715 KPNA6O60684 536 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 SDSP20132 328 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 RFC2P35250 354 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 HIC1Q14526 733 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 USH1GQ495M9 461 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 GPATCH4Q5T3I0 446 aaKnown RBP13.01□□□□□ -0.33
HERC1-204ENST00000559715 GDF6Q6KF10 455 aaPredicted RBP13.01□□□□□ -0.33
HERC1-204ENST00000559715 TRAF7Q6Q0C0 670 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 PLEKHM2Q8IWE5 1019 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 MAF1Q9H063 256 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 IL25Q9H293 177 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 OSBPL3Q9H4L5 887 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 PNMA2Q9UL42 364 aa13.01□□□□□ -0.33
HERC1-204ENST00000559715 LCHNA4D1U4 455 aa13□□□□□ -0.33
HERC1-204ENST00000559715 ZBBXA8MT70 800 aa13□□□□□ -0.33
HERC1-204ENST00000559715 RGS20O76081 388 aa13□□□□□ -0.33
HERC1-204ENST00000559715 MMP3P08254 477 aa13□□□□□ -0.33
HERC1-204ENST00000559715 COL9A1P20849 921 aa13□□□□□ -0.33
HERC1-204ENST00000559715 KCNQ1P51787 676 aa13□□□□□ -0.33
HERC1-204ENST00000559715 GHRHRQ02643 423 aa13□□□□□ -0.33
HERC1-204ENST00000559715 RBL2Q08999 1139 aa13□□□□□ -0.33
HERC1-204ENST00000559715 LY6KQ17RY6 165 aa13□□□□□ -0.33
HERC1-204ENST00000559715 TRIM71Q2Q1W2 868 aaKnown RBP13□□□□□ -0.33
HERC1-204ENST00000559715 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
HERC1-204ENST00000559715 ENAHQ8N8S7 591 aaPredicted RBP13□□□□□ -0.33
HERC1-204ENST00000559715 PNMA1Q8ND90 353 aa13□□□□□ -0.33
HERC1-204ENST00000559715 WNT8BQ93098 351 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms