RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 GHRHRQ02643 423 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 DGKZQ13574 1117 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 USP50Q70EL3 339 aaPredicted RBP14.3□□□□□ -0.12
USP3-213ENST00000559711 ZC3H15Q8WU90 426 aaKnown RBP14.3□□□□□ -0.12
USP3-213ENST00000559711 AGBL1Q96MI9 1066 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 DACH1Q9UI36 760 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 FLOT1O75955 427 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 CFBP00751 764 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 PLCG1P19174 1290 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 CASP1P29466 404 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 ZNF75DP51815 510 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 MYL5Q02045 173 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 CUL4BQ13620 913 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 SLFN12Q8IYM2 578 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 RASSF8Q8NHQ8 419 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 ETNPPLQ8TBG4 499 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 LRRC15Q8TF66 581 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 STAMQ92783 540 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 LENG9Q96B70 501 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 CALML4Q96GE6 196 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 CCPG1Q9ULG6 757 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 PCDHA12Q9UN75 941 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 AFG3L2Q9Y4W6 797 aa14.3□□□□□ -0.12
USP3-213ENST00000559711 SLC26A4O43511 780 aa14.29□□□□□ -0.12
USP3-213ENST00000559711 HSD17B4P51659 736 aa14.29□□□□□ -0.12
USP3-213ENST00000559711 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
USP3-213ENST00000559711 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.29□□□□□ -0.12
USP3-213ENST00000559711 SAMD3Q8N6K7 520 aa14.29□□□□□ -0.12
USP3-213ENST00000559711 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
USP3-213ENST00000559711 FAM20AQ96MK3 541 aa14.29□□□□□ -0.12
USP3-213ENST00000559711 TRIM5Q9C035 493 aa14.29□□□□□ -0.12
USP3-213ENST00000559711 ATAD5Q96QE3 1844 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 ADM5C9JUS6 153 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 FAM86B1E9PN63 330 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 PPP1R12BO60237 982 aaPredicted RBP14.28□□□□□ -0.12
USP3-213ENST00000559711 MARCH6O60337 910 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 ZBED4O75132 1171 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 FAM86B2P0C5J1 330 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 ERCC5P28715 1186 aaPredicted RBP14.28□□□□□ -0.12
USP3-213ENST00000559711 HMGCS2P54868 508 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 TPM4P67936 248 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 GRB10Q13322 594 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 SH3D19Q5HYK7 790 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 KRT79Q5XKE5 535 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 KRT26Q7Z3Y9 468 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.28□□□□□ -0.12
USP3-213ENST00000559711 FCHSD1Q86WN1 690 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 MCF2L2Q86YR7 1114 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 ENOX1Q8TC92 643 aaKnown RBP14.28□□□□□ -0.12
USP3-213ENST00000559711 PNMA5Q96PV4 448 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 HSD3B7Q9H2F3 369 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 BLZF1Q9H2G9 400 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 RMND1Q9NWS8 449 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 MAP3K20Q9NYL2 800 aaKnown RBP14.28□□□□□ -0.12
USP3-213ENST00000559711 STK17AQ9UEE5 414 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 ADAMTS5Q9UNA0 930 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 SNCAIPQ9Y6H5 919 aa14.28□□□□□ -0.12
USP3-213ENST00000559711 GLTPD2A6NH11 291 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 POTEMA6NI47 508 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 VWA5AO00534 786 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 GRIN3BO60391 1043 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.12
USP3-213ENST00000559711 CDC25BP30305 580 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 EPHX2P34913 555 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 KCNB1Q14721 858 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 GPR162Q16538 588 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 TMEM119Q4V9L6 283 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 PRR16Q569H4 304 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 HYIQ5T013 277 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 DLK2Q6UY11 383 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 RBM46Q8TBY0 533 aaKnown RBP14.27□□□□□ -0.12
USP3-213ENST00000559711 MRFAP1L1Q96HT8 127 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 PLIN2Q99541 437 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 RAVER2Q9HCJ3 691 aaKnown RBP14.27□□□□□ -0.12
USP3-213ENST00000559711 DOCK1Q14185 1865 aa14.27□□□□□ -0.12
USP3-213ENST00000559711 IGLV3-22A0A075B6J6 115 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 PRKG1Q13976 671 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 VGLL4Q14135 290 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 CATSPERGQ6ZRH7 1159 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 SNX29Q8TEQ0 813 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 GJA10Q969M2 543 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 C7orf25Q9BPX7 421 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 NUDT12Q9BQG2 462 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 BLOC1S4Q9NUP1 217 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 PPP1R3GB7ZBB8 358 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 MSH4O15457 936 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 KLRC4O43908 158 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 PTMAP06454 111 aaKnown RBP14.26□□□□□ -0.13
USP3-213ENST00000559711 DSG3P32926 999 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 AMPD3Q01432 767 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.13
USP3-213ENST00000559711 SPIRE1Q08AE8 756 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 COG2Q14746 738 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 CPXCR1Q8N123 301 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 REPS2Q8NFH8 660 aa14.26□□□□□ -0.13
USP3-213ENST00000559711 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms