RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 Q6ZUG5 572 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CCDC125Q86Z20 511 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 WDR75Q8IWA0 830 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 C16orf71Q8IYS4 520 aaPredicted RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 EIF1ADQ8N9N8 165 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 VPS37AQ8NEZ2 397 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PI4K2BQ8TCG2 481 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 OTUD5Q96G74 571 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 AGAP3Q96P47 875 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ABCB6Q9NP58 842 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 HAUS2Q9NVX0 235 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 AATFQ9NY61 560 aaKnown RBP eCLIP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PALD1Q9ULE6 856 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 R3HDM2Q9Y2K5 976 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 SAR1BQ9Y6B6 198 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PARP3Q9Y6F1 533 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 NFAT5O94916 1531 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CRB1P82279 1406 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 AK9Q5TCS8 1911 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 POTEFA5A3E0 1075 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 F8VZ95 297 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 MCF2LO15068 1137 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ASAP2O43150 1006 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 RHOXF2BP0C7M4 288 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 POTEIP0CG38 1075 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 VHLP40337 213 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 USP14P54578 494 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ZC3H6P61129 1189 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 SSRP1Q08945 709 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 IFT88Q13099 833 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 SGSM1Q2NKQ1 1148 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 VWA3BQ502W6 1294 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PDCD4Q53EL6 469 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 KRT27Q7Z3Y8 459 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 SYCE1Q8N0S2 351 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 GALNT15Q8N3T1 639 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 FERMT2Q96AC1 680 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 LENG1Q96BZ8 264 aaPredicted RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 TMEM87BQ96K49 555 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CEP19Q96LK0 163 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 RHOXF2Q9BQY4 288 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 DDX21Q9NR30 783 aaKnown RBP eCLIP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CCDC87Q9NVE4 849 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 QPCTLQ9NXS2 382 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PCSK1NQ9UHG2 260 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 UTP11Q9Y3A2 253 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 SLIT3O75094 1523 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PREX1Q8TCU6 1659 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 MED23Q9ULK4 1368 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 SPEF2Q9C093 1822 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 KIDINS220Q9ULH0 1771 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 FRMD3A2A2Y4 597 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CCDC160A6NGH7 325 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CCDC169A6NNP5 214 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 N4BP3O15049 544 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PRPF3O43395 683 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ZNF202O95125 648 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 KRT7P08729 469 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ALOX5P09917 674 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CDR2Q01850 454 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 E4F1Q66K89 784 aaPredicted RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ZNF449Q6P9G9 518 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 C11orf57Q6ZUT1 292 aaPredicted RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CD302Q8IX05 232 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 TSPYL6Q8N831 410 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 COG1Q8WTW3 980 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CENPTQ96BT3 561 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 RBM41Q96IZ5 413 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CAPZA3Q96KX2 299 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ATP6V1G3Q96LB4 118 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 FAM96AQ9H5X1 160 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PALMDQ9NP74 551 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 DNAJC17Q9NVM6 304 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 GID8Q9NWU2 228 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PUF60Q9UHX1 559 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CROTQ9UKG9 612 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 BLOC1S6Q9UL45 172 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 MKL2Q9ULH7 1088 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 MRPL11Q9Y3B7 192 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 USP16Q9Y5T5 823 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 RIMS1Q86UR5 1692 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 LMO7Q8WWI1 1683 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 OVOS2A0A0J9YW53 1432 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 TECPR2O15040 1411 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 OVOS2Q6IE36 1432 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 AKAP12Q02952 1782 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 MED1Q15648 1581 aaPredicted RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 COL15A1P39059 1388 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 USP31Q70CQ4 1352 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PALLDQ8WX93 1383 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ABCC6O95255 1503 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 CD163L1Q9NR16 1453 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 SMIM31A0A1B0GVY4 71 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 PABPN1LA6NDY0 278 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 ACTN4O43707 911 aaKnown RBP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 OPHN1O60890 802 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 SMNDC1O75940 238 aaKnown RBP eCLIP2.6□□□□□ -1.99
RGPD1-204ENST00000559485 LCA5LO95447 670 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 GAS8O95995 478 aa2.6□□□□□ -1.99
RGPD1-204ENST00000559485 OATP04181 439 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms