RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 ANKRD7Q92527 254 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 RAD54LQ92698 747 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 PRMT6Q96LA8 375 aaPredicted RBP12.63□□□□□ -0.39
CLPX-204ENST00000559152 SRRTQ9BXP5 876 aaKnown RBP12.63□□□□□ -0.39
CLPX-204ENST00000559152 VPS16Q9H269 839 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 L2HGDHQ9H9P8 463 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 BMP2KQ9NSY1 1161 aaPredicted RBP12.63□□□□□ -0.39
CLPX-204ENST00000559152 FAM196BA6NMK8 535 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 EDIL3O43854 480 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 BMP3P12645 472 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 FECHP22830 423 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 UBXN1Q04323 297 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 TTI2Q6NXR4 508 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 FBXO11Q86XK2 927 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 SIAH1Q8IUQ4 282 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 PNMA5Q96PV4 448 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 TAB2Q9NYJ8 693 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 LGALS16A8MUM7 142 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 NDUFB10O96000 172 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 CASP14P31944 242 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 DNM2P50570 870 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 DLGAP5Q15398 846 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 TMEM119Q4V9L6 283 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 SYDE2Q5VT97 1194 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 CPLX3Q8WVH0 158 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 FAM151AQ8WW52 585 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLPX-204ENST00000559152 BLOC1S4Q9NUP1 217 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 DNAI1Q9UI46 699 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 MYH4Q9Y623 1939 aa12.62□□□□□ -0.39
CLPX-204ENST00000559152 TBX3O15119 743 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 GDF11O95390 407 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 GH2P01242 217 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 GYPCP04921 128 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 VIL1P09327 827 aaKnown RBP12.61□□□□□ -0.39
CLPX-204ENST00000559152 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
CLPX-204ENST00000559152 HYIQ5T013 277 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 FKBP1CQ5VVH2 108 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 IRF2BP1Q8IU81 584 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 ZNF710Q8N1W2 664 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 HAS1Q92839 578 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 IQCDQ96DY2 449 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 MBOAT7Q96N66 472 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
CLPX-204ENST00000559152 NUP58Q9BVL2 599 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 ANO3Q9BYT9 981 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 SCN9AQ15858 1988 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 TRIM49BA6NDI0 452 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 POTEMA6NI47 508 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 STK4Q13043 487 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
CLPX-204ENST00000559152 TRIM65Q6PJ69 517 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 RETREG2Q8NC44 543 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 SLC16A10Q8TF71 515 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
CLPX-204ENST00000559152 SIPA1L1O43166 1804 aa12.61□□□□□ -0.39
CLPX-204ENST00000559152 SPDYE3A6NKU9 549 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 COBLO75128 1261 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 MMP14P50281 582 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
CLPX-204ENST00000559152 NCBP1Q09161 790 aaKnown RBP12.6□□□□□ -0.39
CLPX-204ENST00000559152 MCM6Q14566 821 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 TOGARAM2Q6ZUX3 1019 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 GUF1Q8N442 669 aaKnown RBP12.6□□□□□ -0.39
CLPX-204ENST00000559152 PDCL2Q8N4E4 241 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 TSC1Q92574 1164 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLPX-204ENST00000559152 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 ABHD10Q9NUJ1 306 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 CGNQ9P2M7 1197 aaKnown RBP12.6□□□□□ -0.39
CLPX-204ENST00000559152 MYMKA6NI61 221 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L11C9JVI0 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L18D6R9N7 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L22D6RA61 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L17D6RBQ6 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L19D6RCP7 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L20D6RJB6 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 MEIS2O14770 477 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 SLURP2P0DP57 97 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 FXR1P51114 621 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLPX-204ENST00000559152 LRRC63Q05C16 580 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L24Q0WX57 530 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 Q4G0T1 1027 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 HAUS3Q68CZ6 603 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 CENPPQ6IPU0 288 aa12.6□□□□□ -0.39
CLPX-204ENST00000559152 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms