RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 GNAQP50148 359 aa20.42■□□□□ 0.86
SMAD3-210ENST00000559092 TSGA10IPQ3SY00 556 aa20.42■□□□□ 0.86
SMAD3-210ENST00000559092 TMEM63BQ5T3F8 832 aa20.42■□□□□ 0.86
SMAD3-210ENST00000559092 CXCL17Q6UXB2 119 aa20.42■□□□□ 0.86
SMAD3-210ENST00000559092 SLC43A3Q8NBI5 491 aa20.42■□□□□ 0.86
SMAD3-210ENST00000559092 CTCFLQ8NI51 663 aaPredicted RBP20.42■□□□□ 0.86
SMAD3-210ENST00000559092 PIGSQ96S52 555 aa20.42■□□□□ 0.86
SMAD3-210ENST00000559092 COL20A1Q9P218 1284 aa20.42■□□□□ 0.86
SMAD3-210ENST00000559092 CCDC69A6NI79 296 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 OPLAHO14841 1288 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 CFBP00751 764 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 CALM1P0DP23 149 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 CALM2P0DP24 149 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 CALM3P0DP25 149 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 CPT1AP50416 773 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 TTLL4Q14679 1199 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 PPP2R5BQ15173 497 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 STXBP2Q15833 593 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 BRDTQ58F21 947 aaPredicted RBP20.41■□□□□ 0.86
SMAD3-210ENST00000559092 ARHGEF16Q5VV41 709 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 NFXL1Q6ZNB6 911 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 HOMER1Q86YM7 354 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 BADQ92934 168 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 SPZ1Q9BXG8 430 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 POLR3EQ9NVU0 708 aa20.41■□□□□ 0.86
SMAD3-210ENST00000559092 KPNA6O60684 536 aa20.4■□□□□ 0.86
SMAD3-210ENST00000559092 EIF3JO75822 258 aaKnown RBP20.4■□□□□ 0.86
SMAD3-210ENST00000559092 RAG1P15918 1043 aa20.4■□□□□ 0.86
SMAD3-210ENST00000559092 OR6J1Q8NGC5 347 aa20.4■□□□□ 0.86
SMAD3-210ENST00000559092 GPHNQ9NQX3 736 aaPredicted RBP20.4■□□□□ 0.86
SMAD3-210ENST00000559092 SOX1O00570 391 aaPredicted RBP20.39■□□□□ 0.85
SMAD3-210ENST00000559092 TLR3O15455 904 aaKnown RBP20.39■□□□□ 0.85
SMAD3-210ENST00000559092 TXNP10599 105 aaKnown RBP20.39■□□□□ 0.85
SMAD3-210ENST00000559092 PTGS1P23219 599 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 ITGA7Q13683 1181 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 KRT32Q14532 448 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 CCDC62Q6P9F0 684 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 SGMS1Q86VZ5 419 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 NEK1Q96PY6 1258 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 PXMP2Q9NR77 195 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 TBX21Q9UL17 535 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 SLC12A7Q9Y666 1083 aa20.39■□□□□ 0.85
SMAD3-210ENST00000559092 A6NJR5 290 aa20.38■□□□□ 0.85
SMAD3-210ENST00000559092 GCOM1H8Y6P7 765 aaPredicted RBP20.38■□□□□ 0.85
SMAD3-210ENST00000559092 TIMP1P01033 207 aa20.38■□□□□ 0.85
SMAD3-210ENST00000559092 NR3C2P08235 984 aa20.38■□□□□ 0.85
SMAD3-210ENST00000559092 POLR2MP0CAP2 368 aa20.38■□□□□ 0.85
SMAD3-210ENST00000559092 ITGB8P26012 769 aa20.38■□□□□ 0.85
SMAD3-210ENST00000559092 FAM126BQ8IXS8 530 aa20.38■□□□□ 0.85
SMAD3-210ENST00000559092 RRP36Q96EU6 259 aaKnown RBP20.38■□□□□ 0.85
SMAD3-210ENST00000559092 GRIN2DO15399 1336 aa20.37■□□□□ 0.85
SMAD3-210ENST00000559092 CD4P01730 458 aa20.37■□□□□ 0.85
SMAD3-210ENST00000559092 EIF2AK2P19525 551 aaKnown RBP20.37■□□□□ 0.85
SMAD3-210ENST00000559092 DHX32Q7L7V1 743 aaKnown RBP20.37■□□□□ 0.85
SMAD3-210ENST00000559092 MYL10Q9BUA6 226 aa20.37■□□□□ 0.85
SMAD3-210ENST00000559092 MCM3APO60318 1980 aa20.37■□□□□ 0.85
SMAD3-210ENST00000559092 HMGB1P09429 215 aaKnown RBP20.36■□□□□ 0.85
SMAD3-210ENST00000559092 PURAQ00577 322 aaKnown RBP20.36■□□□□ 0.85
SMAD3-210ENST00000559092 EXOSC10Q01780 885 aaKnown RBP20.36■□□□□ 0.85
SMAD3-210ENST00000559092 COL9A3Q14050 684 aaPredicted RBP20.36■□□□□ 0.85
SMAD3-210ENST00000559092 SYNE3Q6ZMZ3 975 aa20.36■□□□□ 0.85
SMAD3-210ENST00000559092 SEPT14Q6ZU15 432 aa20.36■□□□□ 0.85
SMAD3-210ENST00000559092 VSIG10LQ86VR7 867 aa20.36■□□□□ 0.85
SMAD3-210ENST00000559092 FANCBQ8NB91 859 aa20.36■□□□□ 0.85
SMAD3-210ENST00000559092 LRCH3Q96II8 777 aa20.36■□□□□ 0.85
SMAD3-210ENST00000559092 PDCD2LQ9BRP1 358 aa20.36■□□□□ 0.85
SMAD3-210ENST00000559092 MTG1Q9BT17 334 aaPredicted RBP20.36■□□□□ 0.85
SMAD3-210ENST00000559092 SEC63Q9UGP8 760 aaKnown RBP20.36■□□□□ 0.85
SMAD3-210ENST00000559092 ARIH2O95376 493 aa20.35■□□□□ 0.85
SMAD3-210ENST00000559092 HOXA13P31271 388 aaPredicted RBP20.35■□□□□ 0.85
SMAD3-210ENST00000559092 FPGSQ05932 587 aa20.35■□□□□ 0.85
SMAD3-210ENST00000559092 ERICH6BQ5W0A0 696 aa20.35■□□□□ 0.85
SMAD3-210ENST00000559092 MFSD5Q6N075 450 aa20.35■□□□□ 0.85
SMAD3-210ENST00000559092 KCNV1Q6PIU1 500 aa20.35■□□□□ 0.85
SMAD3-210ENST00000559092 RASEFQ8IZ41 740 aa20.35■□□□□ 0.85
SMAD3-210ENST00000559092 SRBD1Q8N5C6 995 aaKnown RBP20.35■□□□□ 0.85
SMAD3-210ENST00000559092 KCNB2Q92953 911 aa20.35■□□□□ 0.85
SMAD3-210ENST00000559092 LCTP09848 1927 aa20.35■□□□□ 0.85
SMAD3-210ENST00000559092 GH1P01241 217 aa20.34■□□□□ 0.85
SMAD3-210ENST00000559092 SHHQ15465 462 aa20.34■□□□□ 0.85
SMAD3-210ENST00000559092 COPS5Q92905 334 aa20.34■□□□□ 0.85
SMAD3-210ENST00000559092 EMID1Q96A84 441 aaPredicted RBP20.34■□□□□ 0.85
SMAD3-210ENST00000559092 LRRC2Q9BYS8 371 aa20.34■□□□□ 0.85
SMAD3-210ENST00000559092 DDX41Q9UJV9 622 aaKnown RBP20.34■□□□□ 0.85
SMAD3-210ENST00000559092 LRRC37A2A6NM11 1700 aa20.33■□□□□ 0.85
SMAD3-210ENST00000559092 MYL3P08590 195 aa20.33■□□□□ 0.85
SMAD3-210ENST00000559092 SUPT20HL2P0C7V6 817 aa20.33■□□□□ 0.85
SMAD3-210ENST00000559092 TGFB3P10600 412 aa20.33■□□□□ 0.85
SMAD3-210ENST00000559092 PSMC6P62333 389 aa20.33■□□□□ 0.85
SMAD3-210ENST00000559092 PGM5Q15124 567 aa20.33■□□□□ 0.85
SMAD3-210ENST00000559092 LY6KQ17RY6 165 aa20.33■□□□□ 0.85
SMAD3-210ENST00000559092 PIBF1Q8WXW3 757 aa20.33■□□□□ 0.85
SMAD3-210ENST00000559092 PIK3CDO00329 1044 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 STAM2O75886 525 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 REC8O95072 547 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 PLEKHA8P1O95397 391 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 CCND2P30279 289 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 ARHGAP1Q07960 439 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 LAMC2Q13753 1193 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 ADCK5Q3MIX3 580 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms