RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PHF20Q9BVI0 1012 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 ZMYND12Q9H0C1 365 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 SH3GLB2Q9NR46 395 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 SLC5A4Q9NY91 659 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 PTPN22Q9Y2R2 807 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 MYH15Q9Y2K3 1946 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 VPS37CA5D8V6 355 aaPredicted RBP14.24□□□□□ -0.13
GABPB1-208ENST00000558970 SPDYE3A6NKU9 549 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 H3BQV1 296 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 GNA11P29992 359 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 CYP2C19P33261 490 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 ALDH5A1P51649 535 aaPredicted RBP14.24□□□□□ -0.13
GABPB1-208ENST00000558970 GNL2Q13823 731 aaKnown RBP14.24□□□□□ -0.13
GABPB1-208ENST00000558970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.13
GABPB1-208ENST00000558970 BLIDQ8IZY5 108 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 RGS22Q8NE09 1264 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 IL31RAQ8NI17 732 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 SH3TC2Q8TF17 1288 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 TRIB2Q92519 343 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 PCDHA4Q9UN74 947 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 KIF3AQ9Y496 699 aa14.24□□□□□ -0.13
GABPB1-208ENST00000558970 RBM19Q9Y4C8 960 aaKnown RBP14.24□□□□□ -0.13
GABPB1-208ENST00000558970 FRMPD3Q5JV73 1810 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 MMP1P03956 469 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 KRT2P35908 639 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 SOX10P56693 466 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 NR5A1Q13285 461 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 NPY5RQ15761 445 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 LARP1BQ659C4 914 aaKnown RBP14.23□□□□□ -0.13
GABPB1-208ENST00000558970 MCTP1Q6DN14 999 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 ARMCX2Q7L311 632 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
GABPB1-208ENST00000558970 ANO3Q9BYT9 981 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 PXMP2Q9NR77 195 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 ADD3Q9UEY8 706 aaKnown RBP14.23□□□□□ -0.13
GABPB1-208ENST00000558970 PCDHA6Q9UN73 950 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 PCDHA8Q9Y5H6 950 aa14.23□□□□□ -0.13
GABPB1-208ENST00000558970 FAM205CA6NFA0 338 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 BTBD18B2RXH4 712 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 PIK3CDO00329 1044 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 PDE4DQ08499 809 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 PGM5Q15124 567 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 SLC9C1Q4G0N8 1177 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 PRAMEF19Q5SWL8 479 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-208ENST00000558970 FBXO16Q8IX29 292 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-208ENST00000558970 DIS3L2Q8IYB7 885 aaKnown RBP14.22□□□□□ -0.13
GABPB1-208ENST00000558970 BICD2Q8TD16 824 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 NSUN6Q8TEA1 469 aaKnown RBP14.22□□□□□ -0.13
GABPB1-208ENST00000558970 FOXD4L4Q8WXT5 416 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-208ENST00000558970 BRMS1Q9HCU9 246 aa14.22□□□□□ -0.13
GABPB1-208ENST00000558970 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
GABPB1-208ENST00000558970 HOXC6P09630 235 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 CNGA1P29973 690 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 GRK4P32298 578 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 CLK2P49760 499 aaKnown RBP14.21□□□□□ -0.13
GABPB1-208ENST00000558970 PRMT2P55345 433 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 GHRHRQ02643 423 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 IRF5Q13568 498 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 SAFBQ15424 915 aaKnown RBP eCLIP14.21□□□□□ -0.13
GABPB1-208ENST00000558970 PIK3AP1Q6ZUJ8 805 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 DNERQ8NFT8 737 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 FBXO18Q8NFZ0 1043 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 PDCD2LQ9BRP1 358 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 TINF2Q9BSI4 451 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 GLT8D2Q9H1C3 349 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 RTEL1Q9NZ71 1219 aa14.21□□□□□ -0.13
GABPB1-208ENST00000558970 ZHX1Q9UKY1 873 aaPredicted RBP14.21□□□□□ -0.13
GABPB1-208ENST00000558970 CCDC194A0A1B0GVG4 234 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 ASB14A6NK59 587 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 KIF28PB7ZC32 967 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 HMGCRP04035 888 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 INHAP05111 366 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 NR3C2P08235 984 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
GABPB1-208ENST00000558970 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
GABPB1-208ENST00000558970 SYT1P21579 422 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 AP3B2Q13367 1082 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 INF2Q27J81 1249 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 EARS2Q5JPH6 523 aaKnown RBP14.2□□□□□ -0.14
GABPB1-208ENST00000558970 MFSD14CQ5VZR4 134 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 FBXO46Q6PJ61 603 aaPredicted RBP14.2□□□□□ -0.14
GABPB1-208ENST00000558970 FERMT3Q86UX7 667 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 SAMD3Q8N6K7 520 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 DAGLBQ8NCG7 672 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 SLAIN1Q8ND83 568 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 UIMC1Q96RL1 719 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 MPHOSPH6Q99547 160 aaKnown RBP14.2□□□□□ -0.14
GABPB1-208ENST00000558970 EHMT1Q9H9B1 1298 aa14.2□□□□□ -0.14
GABPB1-208ENST00000558970 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.2□□□□□ -0.14
GABPB1-208ENST00000558970 MAP3K20Q9NYL2 800 aaKnown RBP14.2□□□□□ -0.14
GABPB1-208ENST00000558970 DIS3Q9Y2L1 958 aaKnown RBP14.2□□□□□ -0.14
GABPB1-208ENST00000558970 RPTORQ8N122 1335 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 SORBS3O60504 671 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 SNAI1O95863 264 aaPredicted RBP14.19□□□□□ -0.14
GABPB1-208ENST00000558970 ATP2B1P20020 1258 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 CCND2P30279 289 aa14.19□□□□□ -0.14
GABPB1-208ENST00000558970 CACNB2Q08289 660 aaPredicted RBP14.19□□□□□ -0.14
GABPB1-208ENST00000558970 NONOQ15233 471 aaKnown RBP eCLIP14.19□□□□□ -0.146e-6■□□□□ 10
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms