RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 FIBPO43427 364 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 YEATS4O95619 227 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 FCER1AP12319 257 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 KCTD2Q14681 263 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 PTPAQ15257 358 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 ZNF174Q15697 407 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 WDR78Q5VTH9 848 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 CCAR1Q8IX12 1150 aaKnown RBP20.58■□□□□ 0.89
CLPX-203ENST00000558958 LINC00301Q8NCQ3 95 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 LEO1Q8WVC0 666 aaPredicted RBP20.58■□□□□ 0.89
CLPX-203ENST00000558958 PURBQ96QR8 312 aaKnown RBP20.58■□□□□ 0.89
CLPX-203ENST00000558958 MMP19Q99542 508 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 GDPD2Q9HCC8 539 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 RCOR1Q9UKL0 485 aa20.58■□□□□ 0.89
CLPX-203ENST00000558958 CYP3A4P08684 503 aa20.57■□□□□ 0.88
CLPX-203ENST00000558958 MAPK4P31152 587 aa20.57■□□□□ 0.88
CLPX-203ENST00000558958 SPATA32Q96LK8 384 aa20.57■□□□□ 0.88
CLPX-203ENST00000558958 RMDN3Q96TC7 470 aa20.57■□□□□ 0.88
CLPX-203ENST00000558958 PXMP2Q9NR77 195 aa20.57■□□□□ 0.88
CLPX-203ENST00000558958 MYH7BA7E2Y1 1941 aa20.57■□□□□ 0.88
CLPX-203ENST00000558958 THSD7BQ9C0I4 1608 aa20.57■□□□□ 0.88
CLPX-203ENST00000558958 STRNO43815 780 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 CCNT1O60563 726 aaKnown RBP20.56■□□□□ 0.88
CLPX-203ENST00000558958 MCM7P33993 719 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 SLC39A14Q15043 492 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 PPP4R3AQ6IN85 833 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 ABRAQ8N0Z2 381 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 NAP1L4Q99733 375 aaKnown RBP20.56■□□□□ 0.88
CLPX-203ENST00000558958 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 CEP131Q9UPN4 1083 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 DNAJC25-GNG10A0A024R161 153 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 CYP3A7-CYP3A51PA0A087WV96 503 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 POTEB2H3BUK9 544 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 BMP15O95972 392 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 GCFC2P16383 781 aaKnown RBP20.56■□□□□ 0.88
CLPX-203ENST00000558958 CYP3A7P24462 503 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 CIITAP33076 1130 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 MCM4P33991 863 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 UBXN2AP68543 259 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 CNTN2Q02246 1040 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 ORC2Q13416 577 aaPredicted RBP20.56■□□□□ 0.88
CLPX-203ENST00000558958 STK38Q15208 465 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 MOXD1Q6UVY6 613 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 GPR142Q7Z601 462 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 FAM133AQ8N9E0 248 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 TMEM87AQ8NBN3 555 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 DNERQ8NFT8 737 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 NSUN6Q8TEA1 469 aaKnown RBP20.56■□□□□ 0.88
CLPX-203ENST00000558958 RNF186Q9NXI6 227 aa20.56■□□□□ 0.88
CLPX-203ENST00000558958 TDP2O95551 362 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 EIF2AK2P19525 551 aaKnown RBP20.55■□□□□ 0.88
CLPX-203ENST00000558958 CSPP1Q1MSJ5 1256 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 ARHGEF16Q5VV41 709 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 PLEKHH3Q7Z736 793 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 IL31RAQ8NI17 732 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 MBOAT7Q96N66 472 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 PDCD2LQ9BRP1 358 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 MORC2Q9Y6X9 1032 aaPredicted RBP20.55■□□□□ 0.88
CLPX-203ENST00000558958 IVNS1ABPQ9Y6Y0 642 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 ELP1O95163 1332 aa20.55■□□□□ 0.88
CLPX-203ENST00000558958 GOLGA6L22H0YM25 854 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 SPTLC2O15270 562 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 PGK2P07205 417 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 PTPREP23469 700 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 PTGDRQ13258 359 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 PGM5Q15124 567 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 PCNX4Q63HM2 1172 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 C4orf32Q8N8J7 132 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 KCNG4Q8TDN1 519 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 ASTN1O14525 1302 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 LCTP09848 1927 aa20.54■□□□□ 0.88
CLPX-203ENST00000558958 SOWAHBA6NEL2 793 aa20.53■□□□□ 0.88
CLPX-203ENST00000558958 NEMFO60524 1076 aa20.53■□□□□ 0.88
CLPX-203ENST00000558958 TRPA1O75762 1119 aa20.53■□□□□ 0.88
CLPX-203ENST00000558958 TBC1D8O95759 1140 aa20.53■□□□□ 0.88
CLPX-203ENST00000558958 ADORA2AP29274 412 aa20.53■□□□□ 0.88
CLPX-203ENST00000558958 ATP2C1P98194 919 aaPredicted RBP20.53■□□□□ 0.88
CLPX-203ENST00000558958 GRB14Q14449 540 aa20.53■□□□□ 0.88
CLPX-203ENST00000558958 XRRA1Q6P2D8 792 aa20.53■□□□□ 0.88
CLPX-203ENST00000558958 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
CLPX-203ENST00000558958 DDX25Q9UHL0 483 aaKnown RBP20.53■□□□□ 0.88
CLPX-203ENST00000558958 FAM86B1E9PN63 330 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 SLC37A4O43826 429 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 PPP6R2O75170 966 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 PRPF40AO75400 957 aaKnown RBP20.52■□□□□ 0.88
CLPX-203ENST00000558958 NR3C2P08235 984 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 FAM86B2P0C5J1 330 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 ZNF76P36508 570 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 FGD4Q96M96 766 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 IWS1Q96ST2 819 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 TMEM60Q9H2L4 133 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 MRVI1Q9Y6F6 885 aa20.52■□□□□ 0.88
CLPX-203ENST00000558958 SLC15A5A6NIM6 579 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 LAD1O00515 517 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 MARCKSP29966 332 aaPredicted RBP20.51■□□□□ 0.87
CLPX-203ENST00000558958 CCND2P30279 289 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 ALDH5A1P51649 535 aaPredicted RBP20.51■□□□□ 0.87
CLPX-203ENST00000558958 MRPS9P82933 396 aaKnown RBP20.51■□□□□ 0.87
CLPX-203ENST00000558958 Q4G0T1 1027 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 CEP55Q53EZ4 464 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 420.6 ms