RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TMEFF2Q9UIK5 374 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-207ENST00000558919 SMG5Q9UPR3 1016 aaKnown RBP5.76□□□□□ -1.49
VPS13C-207ENST00000558919 TIMM13Q9Y5L4 95 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-207ENST00000558919 ARNTLO00327 626 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 N4BP3O15049 544 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 FGFR1P11362 822 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 LTBRP36941 435 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 RPL11P62913 178 aaKnown RBP5.75□□□□□ -1.49
VPS13C-207ENST00000558919 KCNA10Q16322 511 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 CILP2Q8IUL8 1156 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 CCDC103Q8IW40 242 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 PPIL6Q8IXY8 311 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 PLEKHO2Q8TD55 490 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 USP33Q8TEY7 942 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 DPF3Q92784 378 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 MKL1Q969V6 931 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 IER2Q9BTL4 223 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 SGPP1Q9BX95 441 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 ARHGEF4Q9NR80 690 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 NUDT5Q9UKK9 219 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 NPFFR2Q9Y5X5 522 aa5.75□□□□□ -1.49
VPS13C-207ENST00000558919 IRS2Q9Y4H2 1338 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 TRAV20A0A0B4J274 112 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 ZC3H12DA2A288 527 aaKnown RBP5.74□□□□□ -1.49
VPS13C-207ENST00000558919 F8W031 263 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-207ENST00000558919 MYO1BO43795 1136 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 DLX3O60479 287 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 FUCA1P04066 466 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 CDR1P51861 262 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 JAG1P78504 1218 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 MTERF2Q49AM1 385 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 WWC2Q6AWC2 1192 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 DENND5AQ6IQ26 1287 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 LDHDQ86WU2 507 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 Q8N1Y9 231 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 MZB1Q8WU39 189 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 PEX11GQ96HA9 241 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 SPATA9Q9BWV2 254 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 MARCH2Q9P0N8 246 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 FBLN5Q9UBX5 448 aa5.74□□□□□ -1.49
VPS13C-207ENST00000558919 DBR1Q9UK59 544 aaKnown RBP5.74□□□□□ -1.49
VPS13C-207ENST00000558919 NPIPB6E9PJ23 425 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 ZBTB7AO95365 584 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 PRR5P85299 388 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 RASA3Q14644 834 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 SLC9A5Q14940 896 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 SPATC1Q76KD6 591 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 RCBTB1Q8NDN9 531 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 TSPAN17Q96FV3 270 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 PCDHA5Q9Y5H7 936 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 X6R8D5 127 aa5.73□□□□□ -1.49
VPS13C-207ENST00000558919 CCDC85CA6NKD9 419 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 C22orf46C9J442 243 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 IRS4O14654 1257 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-207ENST00000558919 PRODHO43272 600 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 NTRK1P04629 796 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 PABPC1P11940 636 aaKnown RBP5.72□□□□□ -1.49
VPS13C-207ENST00000558919 CFPP27918 469 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 EPHB3P54753 998 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 LINC00310P59036 64 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 IFRD2Q12894 506 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-207ENST00000558919 LSAMPQ13449 338 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 MROH9Q5TGP6 573 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 RSPO2Q6UXX9 243 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-207ENST00000558919 NSMFQ6X4W1 530 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 DCP2Q8IU60 420 aaKnown RBP5.72□□□□□ -1.49
VPS13C-207ENST00000558919 RIOX2Q8IUF8 465 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 TEX2Q8IWB9 1127 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 ZSCAN18Q8TBC5 510 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-207ENST00000558919 OSBP2Q969R2 916 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 SIGLEC10Q96LC7 697 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 DEPDC7Q96QD5 511 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 GPR27Q9NS67 375 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 BTG4Q9NY30 223 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 CNOT6Q9ULM6 557 aaKnown RBP5.72□□□□□ -1.49
VPS13C-207ENST00000558919 IRAK3Q9Y616 596 aa5.72□□□□□ -1.49
VPS13C-207ENST00000558919 H7BY64 318 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 LCP1P13796 627 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 PFKLP17858 780 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 FBLN1P23142 703 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 BCL6P41182 706 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 ZNF200P98182 395 aaPredicted RBP5.71□□□□□ -1.5
VPS13C-207ENST00000558919 SSRP1Q08945 709 aaKnown RBP5.71□□□□□ -1.5
VPS13C-207ENST00000558919 TARBP2Q15633 366 aaKnown RBP5.71□□□□□ -1.5
VPS13C-207ENST00000558919 LONRF2Q1L5Z9 754 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 ZNF385BQ569K4 471 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 CIAPIN1Q6FI81 312 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 CEP68Q76N32 757 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 NLRP10Q86W26 655 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 C1QL4Q86Z23 238 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 IGDCC3Q8IVU1 814 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 DCAF4Q8WV16 495 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 TRMT2BQ96GJ1 504 aaKnown RBP5.71□□□□□ -1.5
VPS13C-207ENST00000558919 TMEM169Q96HH4 297 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 DRC1Q96MC2 740 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 RNF38Q9H0F5 515 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 SNTG2Q9NY99 539 aa5.71□□□□□ -1.5
VPS13C-207ENST00000558919 KCTD3Q9Y597 815 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms